RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 GTF2IRD2Q86UP8 949 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 SHKBP1Q8TBC3 707 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 PIWIL2Q8TC59 973 aaKnown RBP7.83□□□□□ -1.16
CKS1B-204ENST00000471245 BRF1Q92994 677 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 Q96M66 194 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 MFSD14AQ96MC6 490 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 NKX2-4Q9H2Z4 354 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 INTS7Q9NVH2 962 aaKnown RBP7.83□□□□□ -1.16
CKS1B-204ENST00000471245 PRR19A6NJB7 356 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 DLX3O60479 287 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 KCNH1O95259 989 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 HOXC12P31275 282 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 NMIQ13287 307 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-204ENST00000471245 CYP27C1Q4G0S4 372 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 DHX37Q8IY37 1157 aaKnown RBP7.82□□□□□ -1.16
CKS1B-204ENST00000471245 ENOX1Q8TC92 643 aaKnown RBP7.82□□□□□ -1.16
CKS1B-204ENST00000471245 KCTD13Q8WZ19 329 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-204ENST00000471245 CHST7Q9NS84 486 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 SFMBT1Q9UHJ3 866 aa7.82□□□□□ -1.16
CKS1B-204ENST00000471245 ALKQ9UM73 1620 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 CNTNAP4Q9C0A0 1308 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 WDR64B1ANS9 1081 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 IRS4O14654 1257 aaPredicted RBP7.81□□□□□ -1.16
CKS1B-204ENST00000471245 PRAMEF1O95521 474 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 CPP00450 1065 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 C6orf222P0C671 652 aaPredicted RBP7.81□□□□□ -1.16
CKS1B-204ENST00000471245 STAT3P40763 770 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 GABREP78334 506 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 PPP2R5DQ14738 602 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 INTS5Q6P9B9 1019 aaKnown RBP7.81□□□□□ -1.16
CKS1B-204ENST00000471245 CHAC2Q8WUX2 184 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 CLUHP3Q96NS8 147 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 CYP26B1Q9NR63 512 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 MAGEC2Q9UBF1 373 aaPredicted RBP7.81□□□□□ -1.16
CKS1B-204ENST00000471245 ZMYM3Q14202 1370 aa7.81□□□□□ -1.16
CKS1B-204ENST00000471245 DNMT1P26358 1616 aaKnown RBP7.81□□□□□ -1.16
CKS1B-204ENST00000471245 NEURL4Q96JN8 1562 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 TROQ12816 1431 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-204ENST00000471245 CPS1P31327 1500 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 A0A087X0B3 334 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 EFCAB14O75071 495 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 GSNP06396 782 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 ITIH2P19823 946 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 AMPD2Q01433 879 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 C21orf62-AS1Q17RA5 79 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
CKS1B-204ENST00000471245 MFSD4AQ8N468 514 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 GSTCDQ8NEC7 633 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
CKS1B-204ENST00000471245 ZDHHC15Q96MV8 337 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 OSBPL1AQ9BXW6 950 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 GPR62Q9BZJ7 368 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 CAAP1Q9H8G2 361 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 MKNK2Q9HBH9 465 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 CAPN6Q9Y6Q1 641 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 SAMD9LQ8IVG5 1584 aa7.8□□□□□ -1.16
CKS1B-204ENST00000471245 BTBD11A6QL63 1104 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 PDE8AO60658 829 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 RAB11FIP3O75154 756 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 CBX7O95931 251 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 SNRPB2P08579 225 aaKnown RBP7.79□□□□□ -1.16
CKS1B-204ENST00000471245 MYCLP1P12525 358 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-204ENST00000471245 SOX5P35711 763 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 MAMDC2Q7Z304 686 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-204ENST00000471245 FBXL6Q8N531 539 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 DAGLBQ8NCG7 672 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 C1orf159Q96HA4 380 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 TRIM39Q9HCM9 518 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 PIM2Q9P1W9 311 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 GPR55Q9Y2T6 319 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-204ENST00000471245 PLXNC1O60486 1568 aa7.79□□□□□ -1.16
CKS1B-204ENST00000471245 PTPRKQ15262 1439 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 GNAT3A8MTJ3 354 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 GSG1L2A8MUP6 293 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 H0Y8X5 98 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 SRFP11831 508 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 FOSL1P15407 271 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 GRIK1P39086 918 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 POU4F1Q01851 419 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 TNK2Q07912 1038 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 SLC35F1Q5T1Q4 408 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 CWF19L1Q69YN2 538 aaKnown RBP7.78□□□□□ -1.16
CKS1B-204ENST00000471245 RNF180Q86T96 592 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 ZNF655Q8N720 491 aaPredicted RBP7.78□□□□□ -1.16
CKS1B-204ENST00000471245 TMEM145Q8NBT3 493 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 PTPRN2Q92932 1015 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 TYW1Q9NV66 732 aaKnown RBP7.78□□□□□ -1.16
CKS1B-204ENST00000471245 STRCP1A6NGW2 1772 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 CLIP1P30622 1438 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 FMN1Q68DA7 1419 aa7.78□□□□□ -1.16
CKS1B-204ENST00000471245 VWDEQ8N2E2 1590 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms