RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 F13A1P00488 732 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-209ENST00000470247 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-209ENST00000470247 NCAPG2Q86XI2 1143 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-209ENST00000470247 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-209ENST00000470247 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
SREBF1-209ENST00000470247 A1CFQ9NQ94 594 aaKnown RBP12.91□□□□□ -0.34
SREBF1-209ENST00000470247 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 TRPA1O75762 1119 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 CFBP00751 764 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 CTGFP29279 349 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 COPB2P35606 906 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 RPS6P62753 249 aaKnown RBP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 CAP1Q01518 475 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 SAFBQ15424 915 aaKnown RBP eCLIP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 FAM173BQ6P4H8 233 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 MAF1Q9H063 256 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 MROH8Q9H579 483 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
SREBF1-209ENST00000470247 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
SREBF1-209ENST00000470247 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 WNT7AO00755 349 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-209ENST00000470247 CCNA1P78396 465 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 NSMFQ6X4W1 530 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 SLC30A10Q6XR72 485 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 REXO1Q8N1G1 1221 aaKnown RBP12.89□□□□□ -0.35
SREBF1-209ENST00000470247 CRYGNQ8WXF5 182 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 PGBD1Q96JS3 809 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 TAAR1Q96RJ0 339 aa12.89□□□□□ -0.35
SREBF1-209ENST00000470247 AP3B2Q13367 1082 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 FGD4Q96M96 766 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 ANO3Q9BYT9 981 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-209ENST00000470247 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 ASTN1O14525 1302 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
SREBF1-209ENST00000470247 STRNO43815 780 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 COBLO75128 1261 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-209ENST00000470247 PTPREP23469 700 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 MAPK4P31152 587 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 GJD2Q9UKL4 321 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
SREBF1-209ENST00000470247 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 FCER1AP12319 257 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 SREBF1P36956 1147 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 GRB14Q14449 540 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
SREBF1-209ENST00000470247 INF2Q27J81 1249 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 MORN1Q5T089 497 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 USP6NLQ92738 828 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
SREBF1-209ENST00000470247 MMP19Q99542 508 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 SAGE1Q9NXZ1 904 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 PFASO15067 1338 aa12.86□□□□□ -0.35
SREBF1-209ENST00000470247 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 GPR25O00155 361 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 PGK2P07205 417 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 CYP3A4P08684 503 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 ADORA2AP29274 412 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-209ENST00000470247 SP3Q02447 781 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 MAP2K1Q02750 393 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-209ENST00000470247 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
SREBF1-209ENST00000470247 NBR1Q14596 966 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms