RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
SMC1A-206ENST00000470241 ADAMTS3O15072 1205 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 CFBP00751 764 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 POLR2MP0CAP2 368 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 CYP2B6P20813 491 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 CALML3P27482 149 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 RGS2P41220 211 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 PRMT2P55345 433 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 HMGN5P82970 282 aaKnown RBP12.15□□□□□ -0.46
SMC1A-206ENST00000470241 CTU1Q7Z7A3 348 aaKnown RBP12.15□□□□□ -0.46
SMC1A-206ENST00000470241 WASF1Q92558 559 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 ALG1Q9BT22 464 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 PSTPIP2Q9H939 334 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 GJB4Q9NTQ9 266 aa12.15□□□□□ -0.46
SMC1A-206ENST00000470241 ASTN1O14525 1302 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 MEIS2O14770 477 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 IRF5Q13568 498 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 DPP9Q86TI2 863 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 CUL5Q93034 780 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 APBA2Q99767 749 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-206ENST00000470241 PTCH2Q9Y6C5 1203 aa12.14□□□□□ -0.47
SMC1A-206ENST00000470241 IGHA2P01877 340 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 XRCC5P13010 732 aaKnown RBP12.13□□□□□ -0.47
SMC1A-206ENST00000470241 GJB2P29033 226 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 ADCY7P51828 1080 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
SMC1A-206ENST00000470241 FOSBP53539 338 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 NLRP5P59047 1200 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 NPY5RQ15761 445 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 CCL14Q16627 93 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 UBE2SQ16763 222 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 FAM177A1Q8N128 213 aaPredicted RBP12.13□□□□□ -0.47
SMC1A-206ENST00000470241 MAML3Q96JK9 1138 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 KCNJ14Q9UNX9 436 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
SMC1A-206ENST00000470241 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 ADCY3O60266 1144 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 GNA11P29992 359 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
SMC1A-206ENST00000470241 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
SMC1A-206ENST00000470241 FCHSD1Q86WN1 690 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 TEX2Q8IWB9 1127 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 DAGLBQ8NCG7 672 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 TRIB2Q92519 343 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 PHF20Q9BVI0 1012 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 GLT8D2Q9H1C3 349 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
SMC1A-206ENST00000470241 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
SMC1A-206ENST00000470241 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 M0R2N6 131 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 ELNP15502 786 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 XBP1P17861 261 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
SMC1A-206ENST00000470241 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 KRT40Q6A162 431 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 GALNT17Q6IS24 598 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 C8orf76Q96K31 380 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 TINF2Q9BSI4 451 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
SMC1A-206ENST00000470241 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
SMC1A-206ENST00000470241 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
SMC1A-206ENST00000470241 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 MGAMO43451 1857 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 MMP1P03956 469 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 EDNRBP24530 442 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 GUCY1B3Q02153 619 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 TRIM32Q13049 653 aa12.1□□□□□ -0.47
SMC1A-206ENST00000470241 PKN2Q16513 984 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms