RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ASB14A6NK59 587 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 NFIBO00712 420 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 ADCY3O60266 1144 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 COBLO75128 1261 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 FOSP01100 380 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 GRK4P32298 578 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 NAPAP54920 295 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 BAATQ14032 418 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 PKN1Q16512 942 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 NECAB1Q8N987 351 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 NSUN6Q8TEA1 469 aaKnown RBP14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 PHKBQ93100 1093 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 IWS1Q96ST2 819 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 ZMYND12Q9H0C1 365 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 GABRQQ9UN88 632 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 CASP8AP2Q9UKL3 1982 aa14.53□□□□□ -0.08
SPTLC1-204ENST00000469778 SYNGAP1Q96PV0 1343 aa14.52□□□□□ -0.08
SPTLC1-204ENST00000469778 PTPDC1A2A3K4 754 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 STXBP3O00186 592 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 CYP2B6P20813 491 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 CALML3P27482 149 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 CAP1Q01518 475 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 MFSD14CQ5VZR4 134 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 WWC2Q6AWC2 1192 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 NOL8Q76FK4 1167 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 PIBF1Q8WXW3 757 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 MAML3Q96JK9 1138 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 RIC8AQ9NPQ8 531 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 ORC3Q9UBD5 711 aaPredicted RBP14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.09
SPTLC1-204ENST00000469778 MGAMO43451 1857 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 SMCO2A6NFE2 343 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 OPLAHO14841 1288 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 CTDNEP1O95476 244 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 CFBP00751 764 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 IGHA2P01877 340 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 HMGCRP04035 888 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 ADCY7P51828 1080 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 UBXN2AP68543 259 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 XRRA1Q6P2D8 792 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 SMARCC2Q8TAQ2 1214 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 SYTL5Q8TDW5 730 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 MORC4Q8TE76 937 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 INTS4Q96HW7 963 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 TINF2Q9BSI4 451 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 EHMT1Q9H9B1 1298 aa14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 BAZ2BQ9UIF8 2168 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-204ENST00000469778 hCG_1642624A0A1W2PR95 340 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 LARGE1O95461 756 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 PGK2P07205 417 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 PDIA4P13667 645 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 AP3B2Q13367 1082 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 CUL4AQ13619 759 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 TRIM29Q14134 588 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 CCDC83Q8IWF9 413 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 ARMC5Q96C12 935 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 RMDN3Q96TC7 470 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
SPTLC1-204ENST00000469778 SPDYE3A6NKU9 549 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 K7ELQ4 463 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 MEIS2O14770 477 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 STAM2O75886 525 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 FDPSP14324 419 aaKnown RBP14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 NLRP5P59047 1200 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 HSCBQ8IWL3 235 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 NPLOC4Q8TAT6 608 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 ABHD16BQ9H3Z7 469 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 CNPY2Q9Y2B0 182 aa14.49□□□□□ -0.09
SPTLC1-204ENST00000469778 SOWAHBA6NEL2 793 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 ECM2O94769 699 aaPredicted RBP14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 CD2BP2O95400 341 aaKnown RBP14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 CNTN2Q02246 1040 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 MAP3K21Q5TCX8 1036 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 SLC30A10Q6XR72 485 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 DAGLBQ8NCG7 672 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 TRIB2Q92519 343 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 TBC1D5Q92609 795 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 ALG1Q9BT22 464 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 MCOLN1Q9GZU1 580 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 BRMS1Q9HCU9 246 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 BIN2Q9UBW5 565 aaPredicted RBP14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 PCDHA4Q9UN74 947 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 MYH6P13533 1939 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
SPTLC1-204ENST00000469778 MSCO60682 206 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 EDNRBP24530 442 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 ALDH5A1P51649 535 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 PDE4DQ08499 809 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 SAFBQ15424 915 aaKnown RBP eCLIP14.47□□□□□ -0.09
SPTLC1-204ENST00000469778 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms