RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NUP58Q9BVL2 599 aa11.47□□□□□ -0.57
SMC4-210ENST00000469762 GOLGA6BA6NDN3 693 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 PRLRP16471 622 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 CALML3P27482 149 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 SND1Q7KZF4 910 aaKnown RBP eCLIP11.46□□□□□ -0.576e-9■■■■■ 32.8
SMC4-210ENST00000469762 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 FNBP4Q8N3X1 1017 aaPredicted RBP11.46□□□□□ -0.57
SMC4-210ENST00000469762 BAP1Q92560 729 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
SMC4-210ENST00000469762 PSMB7Q99436 277 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 TLR10Q9BXR5 811 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 SLAIN2Q9P270 581 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 CELF1Q92879 486 aaKnown RBP11.46□□□□□ -0.57
SMC4-210ENST00000469762 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 DRC1Q96MC2 740 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
SMC4-210ENST00000469762 CPVLQ9H3G5 476 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 RABEP2Q9H5N1 569 aa11.46□□□□□ -0.57
SMC4-210ENST00000469762 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 PRPHP41219 470 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 UBA7P41226 1012 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 CCT5P48643 541 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 PDE4DQ08499 809 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 GRM4Q14833 912 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 ERFEQ4G0M1 354 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 PARP10Q53GL7 1025 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 DNAJC21Q5F1R6 531 aaKnown RBP11.46□□□□□ -0.58
SMC4-210ENST00000469762 CERS3Q8IU89 383 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 PNMA1Q8ND90 353 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.58
SMC4-210ENST00000469762 ANKS1AQ92625 1134 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 DYNLL2Q96FJ2 89 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.58
SMC4-210ENST00000469762 EIF4A3P38919 411 aaKnown RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 KIF11P52732 1056 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 KIF5AQ12840 1032 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 TTC31Q49AM3 519 aaPredicted RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 TTC19Q6DKK2 380 aaPredicted RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 GLIS3Q8NEA6 775 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 FAM76AQ8TAV0 307 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 CRACR2AQ9BSW2 395 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 BSDC1Q9NW68 430 aaPredicted RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 COBLL1Q53SF7 1204 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 ICE2Q659A1 982 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 HGSNATQ68CP4 663 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 AMOTL1Q8IY63 956 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 CAGE1Q8TC20 777 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 PIK3R5Q8WYR1 880 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 BARHL2Q9NY43 387 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 MAGEC2Q9UBF1 373 aaPredicted RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 ZSCAN5CA6NGD5 496 aaPredicted RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 TFAP4Q01664 338 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 TADA2BQ86TJ2 420 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 CABP7Q86V35 215 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 C2CD5Q86YS7 1000 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 EFCAB13Q8IY85 973 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 TRIM58Q8NG06 486 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 MS4A14Q96JA4 679 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 IFIH1Q9BYX4 1025 aaKnown RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 RBM12Q9NTZ6 932 aaKnown RBP11.45□□□□□ -0.58
SMC4-210ENST00000469762 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
SMC4-210ENST00000469762 IRS2Q9Y4H2 1338 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.588e-6■□□□□ 10.6
SMC4-210ENST00000469762 FAM153BP0C7A2 387 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 EPB41P11171 864 aaKnown RBP11.44□□□□□ -0.58
SMC4-210ENST00000469762 ATP2B2Q01814 1243 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
SMC4-210ENST00000469762 FAM153CQ494X1 144 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 FAM153AQ9UHL3 310 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 GLI1P08151 1106 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 PPFIA1Q13136 1202 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 SLC39A2Q9NP94 309 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 FAM207AQ9NSI2 230 aaPredicted RBP11.44□□□□□ -0.58
SMC4-210ENST00000469762 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
SMC4-210ENST00000469762 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 PJA2O43164 708 aa11.44□□□□□ -0.58
SMC4-210ENST00000469762 MTIF2P46199 727 aaKnown RBP11.44□□□□□ -0.58
SMC4-210ENST00000469762 KCNMA1Q12791 1236 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms