RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 SPTLC2O15270 562 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 TSPY3P0CV98 308 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 TSPY8P0CW00 308 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 CAP2P40123 477 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 JAG1P78504 1218 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 TFAP4Q01664 338 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 TMEM139Q8IV31 216 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 ESR2Q92731 530 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF274Q96GC6 653 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 ARGLU1Q9NWB6 273 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 PFKFB1P16118 471 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 OAS2P29728 719 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 WDR24Q96S15 920 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 GOLGA8BA8MQT2 603 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 GH2P01242 217 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 FKBP1BP68106 108 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 CCDC17Q96LX7 622 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 IKBKBO14920 756 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 YEATS4O95619 227 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 TFRCP02786 760 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 UBASH3AP57075 661 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 DESI2Q9BSY9 194 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 VGLL4Q14135 290 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 MCM6Q14566 821 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 AIFM3Q96NN9 605 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 CSADQ9Y600 493 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 NRDCO43847 1150 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 NMT2O60551 498 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 TPM4P67936 248 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 CLMNQ96JQ2 1002 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
SEMA4D-215ENST00000469653 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 KCNA1Q09470 495 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 SEPT2Q15019 361 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 VSTM4Q8IW00 320 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 FBXO18Q8NFZ0 1043 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 PMM1Q92871 262 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 FAM117AQ9C073 453 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 PICK1Q9NRD5 415 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
SEMA4D-215ENST00000469653 ASNSP08243 561 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 GUCY1A2P33402 732 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 SATB1Q01826 763 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 C8orf76Q96K31 380 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 IL17RBQ9NRM6 502 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 TUBE1Q9UJT0 475 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 PPP2R2CQ9Y2T4 447 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 CMA1P23946 247 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 MUM1L1Q5H9M0 696 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 CLEC10AQ8IUN9 316 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 ELP3Q9H9T3 547 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 SNCAIPQ9Y6H5 919 aa11.21□□□□□ -0.62
SEMA4D-215ENST00000469653 CCP110O43303 1012 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 PRC1O43663 620 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 HUNKP57058 714 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 ANTXR2P58335 489 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 PNOCQ13519 176 aa11.2□□□□□ -0.62
SEMA4D-215ENST00000469653 KCTD19Q17RG1 926 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms