RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
SRRT-208ENST00000469602 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 DNM1LO00429 736 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 OPLAHO14841 1288 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 ZBTB43O43298 467 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 COL6A1P12109 1028 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
SRRT-208ENST00000469602 RPS6KB1P23443 525 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 PSMA5P28066 241 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 ALDH5A1P51649 535 aaPredicted RBP11.28□□□□□ -0.6
SRRT-208ENST00000469602 FGD1P98174 961 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
SRRT-208ENST00000469602 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 DNERQ8NFT8 737 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 MORC4Q8TE76 937 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
SRRT-208ENST00000469602 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
SRRT-208ENST00000469602 KIAA1217Q5T5P2 1943 aa11.27□□□□□ -0.6
SRRT-208ENST00000469602 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 RCAN1P53805 252 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 GHRHRQ02643 423 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 GJC2Q5T442 439 aaPredicted RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 Q6ZUG5 572 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 TMTC3Q6ZXV5 915 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 FBXL16Q8N461 479 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 DPF3Q92784 378 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
SRRT-208ENST00000469602 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
SRRT-208ENST00000469602 B4DLN1 442 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 ADCY6O43306 1168 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 EIF5BO60841 1220 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 PGK1P00558 417 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 CFBP00751 764 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 EDNRBP24530 442 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 HSD17B4P51659 736 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 LRRC41Q15345 812 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 RTN1Q16799 776 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 PRPF38BQ5VTL8 546 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 RNF180Q86T96 592 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 BRF1Q92994 677 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 MAP3K20Q9NYL2 800 aaKnown RBP11.26□□□□□ -0.61
SRRT-208ENST00000469602 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
SRRT-208ENST00000469602 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 EVI5O60447 810 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 ADAMTS4O75173 837 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 PDE4DQ08499 809 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 SAMD3Q8N6K7 520 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
SRRT-208ENST00000469602 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
SRRT-208ENST00000469602 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
SRRT-208ENST00000469602 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 GOLGA8AA7E2F4 631 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 POLR2MP0CAP2 368 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 HOXA13P31271 388 aaPredicted RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
SRRT-208ENST00000469602 GJA9P57773 515 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 IQSEC1Q6DN90 963 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 KLHDC9Q8NEP7 349 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 IWS1Q96ST2 819 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 SENP6Q9GZR1 1112 aaPredicted RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 UPF3AQ9H1J1 476 aaKnown RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 SPC25Q9HBM1 224 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
SRRT-208ENST00000469602 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
SRRT-208ENST00000469602 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms