RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 DNERQ8NFT8 737 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 SNAI1O95863 264 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 CALML3P27482 149 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 EVCP57679 992 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 MORC4Q8TE76 937 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 NAP1L2Q9ULW6 460 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-205ENST00000468676 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 FARP2O94887 1054 aaPredicted RBP17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 ZNF865P0CJ78 1059 aaPredicted RBP17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 AKR1A1P14550 325 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 ALDH5A1P51649 535 aaPredicted RBP17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 GHRHRQ02643 423 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 APOBRQ0VD83 1088 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 RAB11FIP4Q86YS3 637 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
TMEM39A-205ENST00000468676 LCTP09848 1927 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 RARBP10826 455 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 METAP2P50579 478 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 ARRDC4Q8NCT1 418 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
TMEM39A-205ENST00000468676 PDE4DIPQ5VU43 2346 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 SEC24BO95487 1268 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 CFBP00751 764 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 HSD17B4P51659 736 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 NSUN6Q8TEA1 469 aaKnown RBP17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 VTA1Q9NP79 307 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 ASTN1O14525 1302 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 NID2Q14112 1375 aa17.09■□□□□ 0.33
TMEM39A-205ENST00000468676 FRMPD3Q5JV73 1810 aa17.08■□□□□ 0.33
TMEM39A-205ENST00000468676 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 OPLAHO14841 1288 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 PDE4DQ08499 809 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 TOB2Q14106 344 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 KATNBL1Q9H079 304 aa17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
TMEM39A-205ENST00000468676 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 TNRC18O15417 2968 aaPredicted RBP17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 EDNRBP24530 442 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 PDIA3P30101 505 aaKnown RBP17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 FUT2Q10981 343 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 IQSEC1Q6DN90 963 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 HTATIP2Q9BUP3 242 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
TMEM39A-205ENST00000468676 CNTNAP5Q8WYK1 1306 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 DNM1LO00429 736 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 CDC27P30260 824 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 ARHGEF16Q5VV41 709 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 RNF180Q86T96 592 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 CUL5Q93034 780 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 PAWRQ96IZ0 340 aaKnown RBP17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 TAAR1Q96RJ0 339 aa17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
TMEM39A-205ENST00000468676 KBTBD13C9JR72 458 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 COL20A1Q9P218 1284 aa17.05■□□□□ 0.32
TMEM39A-205ENST00000468676 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms