RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 B4DLN1 442 aa23.17■■□□□ 1.3
NPHP4-206ENST00000468253 ZNF865P0CJ78 1059 aaPredicted RBP23.17■■□□□ 1.3
NPHP4-206ENST00000468253 MRPL12P52815 198 aaKnown RBP23.17■■□□□ 1.3
NPHP4-206ENST00000468253 FUT2Q10981 343 aa23.17■■□□□ 1.3
NPHP4-206ENST00000468253 TOB2Q14106 344 aaPredicted RBP23.17■■□□□ 1.3
NPHP4-206ENST00000468253 PRAMEF19Q5SWL8 479 aa23.17■■□□□ 1.3
NPHP4-206ENST00000468253 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.17■■□□□ 1.3
NPHP4-206ENST00000468253 DDX20Q9UHI6 824 aaKnown RBP23.17■■□□□ 1.3
NPHP4-206ENST00000468253 ZNFX1Q9P2E3 1918 aaKnown RBP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 GOLGA8AA7E2F4 631 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 GOLGA8BA8MQT2 603 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 CNGA1P29973 690 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 PDIA3P30101 505 aaKnown RBP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 METAP2P50579 478 aaKnown RBP eCLIP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 ACVR2BQ13705 512 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 ARMCX2Q7L311 632 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 RAB11FIP4Q86YS3 637 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 SYTL5Q8TDW5 730 aaPredicted RBP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 TBC1D5Q92609 795 aa23.16■■□□□ 1.3
NPHP4-206ENST00000468253 MPHOSPH6Q99547 160 aaKnown RBP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
NPHP4-206ENST00000468253 NID2Q14112 1375 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 OPLAHO14841 1288 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 CALML3P27482 149 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 ADD1P35611 737 aaKnown RBP23.15■■□□□ 1.3
NPHP4-206ENST00000468253 HSD17B4P51659 736 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 TEX2Q8IWB9 1127 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 CMTR1Q8N1G2 835 aaKnown RBP23.15■■□□□ 1.3
NPHP4-206ENST00000468253 SHISA4Q96DD7 197 aa23.15■■□□□ 1.3
NPHP4-206ENST00000468253 ASTN1O14525 1302 aa23.14■■□□□ 1.3
NPHP4-206ENST00000468253 CDC27P30260 824 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 ANKRD1Q15327 319 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 SLC30A10Q6XR72 485 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 UBE2Q1Q7Z7E8 422 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 IWS1Q96ST2 819 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 KATNBL1Q9H079 304 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 FAM184BQ9ULE4 1060 aa23.14■■□□□ 1.29
NPHP4-206ENST00000468253 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.29
NPHP4-206ENST00000468253 ALDH5A1P51649 535 aaPredicted RBP23.13■■□□□ 1.29
NPHP4-206ENST00000468253 MLLT1Q03111 559 aaPredicted RBP23.13■■□□□ 1.29
NPHP4-206ENST00000468253 NSUN6Q8TEA1 469 aaKnown RBP23.13■■□□□ 1.29
NPHP4-206ENST00000468253 PURBQ96QR8 312 aaKnown RBP23.13■■□□□ 1.29
NPHP4-206ENST00000468253 V9GY48 417 aaPredicted RBP23.13■■□□□ 1.29
NPHP4-206ENST00000468253 SMCHD1A6NHR9 2005 aa23.13■■□□□ 1.29
NPHP4-206ENST00000468253 GCOM1H8Y6P7 765 aaPredicted RBP23.12■■□□□ 1.29
NPHP4-206ENST00000468253 CFBP00751 764 aa23.12■■□□□ 1.29
NPHP4-206ENST00000468253 POLR2MP0CAP2 368 aa23.12■■□□□ 1.29
NPHP4-206ENST00000468253 AKR1A1P14550 325 aa23.12■■□□□ 1.29
NPHP4-206ENST00000468253 EDNRBP24530 442 aa23.12■■□□□ 1.29
NPHP4-206ENST00000468253 PIBF1Q8WXW3 757 aa23.12■■□□□ 1.29
NPHP4-206ENST00000468253 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
NPHP4-206ENST00000468253 BAZ2BQ9UIF8 2168 aaKnown RBP23.12■■□□□ 1.29
NPHP4-206ENST00000468253 IQSEC1Q6DN90 963 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 ARRDC4Q8NCT1 418 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 IL27Q8NEV9 243 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 TAAR1Q96RJ0 339 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 RMDN3Q96TC7 470 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
NPHP4-206ENST00000468253 hCG_1984214I3L0E3 225 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 PIK3CDO00329 1044 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 RARBP10826 455 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 IFNAR1P17181 557 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 NTRK3Q16288 839 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 ZNF713Q8N859 430 aaPredicted RBP23.1■■□□□ 1.29
NPHP4-206ENST00000468253 BRCA2P51587 3418 aa23.1■■□□□ 1.29
NPHP4-206ENST00000468253 CNTNAP5Q8WYK1 1306 aa23.09■■□□□ 1.29
NPHP4-206ENST00000468253 PRPF3O43395 683 aaKnown RBP23.09■■□□□ 1.29
NPHP4-206ENST00000468253 DUSP11O75319 330 aaKnown RBP23.09■■□□□ 1.29
NPHP4-206ENST00000468253 RBM25P49756 843 aaKnown RBP23.09■■□□□ 1.29
NPHP4-206ENST00000468253 CCDC144BQ3MJ40 725 aa23.09■■□□□ 1.29
NPHP4-206ENST00000468253 C22orf23Q9BZE7 217 aa23.09■■□□□ 1.29
NPHP4-206ENST00000468253 COL20A1Q9P218 1284 aa23.09■■□□□ 1.29
NPHP4-206ENST00000468253 ZHX1Q9UKY1 873 aaPredicted RBP23.09■■□□□ 1.29
NPHP4-206ENST00000468253 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
NPHP4-206ENST00000468253 FARP2O94887 1054 aaPredicted RBP23.08■■□□□ 1.29
NPHP4-206ENST00000468253 MNX1P50219 401 aaPredicted RBP23.08■■□□□ 1.29
NPHP4-206ENST00000468253 NEK4P51957 841 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 PDE4DQ08499 809 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 TAPT1Q6NXT6 567 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 NECAB2Q7Z6G3 386 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 PSTPIP2Q9H939 334 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 Q9Y3F1 56 aa23.08■■□□□ 1.29
NPHP4-206ENST00000468253 hCG_1642624A0A1W2PR95 340 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 NKX3-2P78367 333 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 ARHGEF16Q5VV41 709 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 PPP1R18Q6NYC8 613 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 CUL5Q93034 780 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 GLT8D2Q9H1C3 349 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 UPF2Q9HAU5 1272 aaKnown RBP23.07■■□□□ 1.28
NPHP4-206ENST00000468253 PXMP2Q9NR77 195 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 BARHL2Q9NY43 387 aa23.07■■□□□ 1.28
NPHP4-206ENST00000468253 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
NPHP4-206ENST00000468253 DNM1LO00429 736 aa23.06■■□□□ 1.28
NPHP4-206ENST00000468253 MEIS2O14770 477 aa23.06■■□□□ 1.28
NPHP4-206ENST00000468253 EIF3JO75822 258 aaKnown RBP23.06■■□□□ 1.28
NPHP4-206ENST00000468253 NR3C2P08235 984 aa23.06■■□□□ 1.28
NPHP4-206ENST00000468253 CCT2P78371 535 aaKnown RBP23.06■■□□□ 1.28
NPHP4-206ENST00000468253 AKAP17AQ02040 695 aaKnown RBP23.06■■□□□ 1.28
NPHP4-206ENST00000468253 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms