RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 SNAI1O95863 264 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 ZNF865P0CJ78 1059 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 AK2P54819 239 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 RTN1Q16799 776 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 ARMCX2Q7L311 632 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 FAM133AQ8N9E0 248 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 ALDH8A1Q9H2A2 487 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 COLQQ9Y215 455 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 NID2Q14112 1375 aa17.15■□□□□ 0.34
PCOLCE-204ENST00000468214 ASB14A6NK59 587 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 PGK1P00558 417 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 GNAQP50148 359 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 ATN1P54259 1190 aaPredicted RBP17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 EVCP57679 992 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 ACVR2BQ13705 512 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 RABEP1Q15276 862 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 LRRC41Q15345 812 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 LRRC26Q2I0M4 334 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 RNF180Q86T96 592 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 FGD4Q96M96 766 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 ABHD16BQ9H3Z7 469 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 RBM28Q9NW13 759 aaKnown RBP17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 ZMYND8Q9ULU4 1186 aaPredicted RBP17.14■□□□□ 0.33
PCOLCE-204ENST00000468214 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 LENG1Q96BZ8 264 aaPredicted RBP17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
PCOLCE-204ENST00000468214 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 NFIBO00712 420 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 SYN1P17600 705 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 BAATQ14032 418 aaPredicted RBP17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 USH1GQ495M9 461 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 JMJD4Q9H9V9 463 aa17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
PCOLCE-204ENST00000468214 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 CYTH3O43739 400 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 CALML3P27482 149 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 PPP2R5BQ15173 497 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 SPC25Q9HBM1 224 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
PCOLCE-204ENST00000468214 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 CDC27P30260 824 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 RTP1P59025 263 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 STK3Q13188 491 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 PIGSQ96S52 555 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 SYNRGQ9UMZ2 1314 aa17.1■□□□□ 0.33
PCOLCE-204ENST00000468214 ZBTB5O15062 677 aa17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 ST18O60284 1047 aa17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 CLEC4DQ8WXI8 215 aa17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 PHF24Q9UPV7 400 aa17.09■□□□□ 0.33
PCOLCE-204ENST00000468214 LRRC37A2A6NM11 1700 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 ASTN1O14525 1302 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 ABCB11O95342 1321 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 ADAMTS4O75173 837 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 C6orf222P0C671 652 aaPredicted RBP17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 ALDH5A1P51649 535 aaPredicted RBP17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 EEPD1Q7L9B9 569 aa17.08■□□□□ 0.32
PCOLCE-204ENST00000468214 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms