RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 MRPL11Q9Y3B7 192 aaKnown RBP13.43□□□□□ -0.26
CDHR3-205ENST00000468143 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
CDHR3-205ENST00000468143 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 ZBTB5O15062 677 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 CYTH3O43739 400 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 CFBP00751 764 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
CDHR3-205ENST00000468143 GJA9P57773 515 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 PDE4DQ08499 809 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 ADCK5Q3MIX3 580 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 GNASQ5JWF2 1037 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 IQSEC1Q6DN90 963 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 CCSAPQ6IQ19 270 aaPredicted RBP13.42□□□□□ -0.26
CDHR3-205ENST00000468143 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
CDHR3-205ENST00000468143 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 SPC25Q9HBM1 224 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
CDHR3-205ENST00000468143 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 CTAGE5O15320 804 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 ASGR1P07306 291 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 MCF2L2Q86YR7 1114 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 DNERQ8NFT8 737 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 TSEN34Q9BSV6 310 aaKnown RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 PRO3102Q9H379 93 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 VTA1Q9NP79 307 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 STARD7Q9NQZ5 370 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 GNEQ9Y223 722 aaKnown RBP13.41□□□□□ -0.26
CDHR3-205ENST00000468143 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
CDHR3-205ENST00000468143 SMCHD1A6NHR9 2005 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 MOXD2PA6NHM9 499 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 OPLAHO14841 1288 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 DDAH1O94760 285 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 TLE2Q04725 743 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 TLK2Q86UE8 772 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 PCSK9Q8NBP7 692 aaKnown RBP13.4□□□□□ -0.26
CDHR3-205ENST00000468143 GDF15Q99988 308 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 WDR11Q9BZH6 1224 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 AP5M1Q9H0R1 490 aa13.4□□□□□ -0.26
CDHR3-205ENST00000468143 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 CPA1P15085 419 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 EDNRBP24530 442 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 CST5P28325 142 aaPredicted RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 LIFRP42702 1097 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 SNX17Q15036 470 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 ARHGEF16Q5VV41 709 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 GLT1D1Q96MS3 346 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 RMDN3Q96TC7 470 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
CDHR3-205ENST00000468143 PRKAG2Q9UGJ0 569 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
CDHR3-205ENST00000468143 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 KIF5BP33176 963 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 FSCN1Q16658 493 aaKnown RBP13.38□□□□□ -0.27
CDHR3-205ENST00000468143 TSGA10IPQ3SY00 556 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 DUSP28Q4G0W2 176 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 SEPT14Q6ZU15 432 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
CDHR3-205ENST00000468143 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
CDHR3-205ENST00000468143 COPS5Q92905 334 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
CDHR3-205ENST00000468143 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
CDHR3-205ENST00000468143 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
CDHR3-205ENST00000468143 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 B4DLN1 442 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 CALM1P0DP23 149 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 CALM2P0DP24 149 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 CALM3P0DP25 149 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 HSPA4P34932 840 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms