RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 C9orf50Q5SZB4 431 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 STOX1Q6ZVD7 989 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 LENG1Q96BZ8 264 aaPredicted RBP16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 ERICH2A1L162 156 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 SLC27A2O14975 620 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 MFSD5Q6N075 450 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 VTI1AQ96AJ9 217 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 AP5M1Q9H0R1 490 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 TBX21Q9UL17 535 aa16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-211ENST00000467553 DLL1O00548 723 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 ITGB8P26012 769 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 PPIGQ13427 754 aaKnown RBP eCLIP16.41■□□□□ 0.224e-10■■□□□ 13.8
CCHCR1-211ENST00000467553 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 SEC23AQ15436 765 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 CREB3L3Q68CJ9 461 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 GUCD1Q96NT3 240 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 SEMA6BQ9H3T3 888 aa16.41■□□□□ 0.22
CCHCR1-211ENST00000467553 UNC80Q8N2C7 3258 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 MYADML2A6NDP7 307 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 ADCY6O43306 1168 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 WTAPQ15007 396 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 SLC43A3Q8NBI5 491 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
CCHCR1-211ENST00000467553 B4DLN1 442 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 CTAGE5O15320 804 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 PARP1P09874 1014 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 FSCN1Q16658 493 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 TLK2Q86UE8 772 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 MB21D2Q8IYB1 491 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-211ENST00000467553 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 CD4P01730 458 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 ANTXR2P58335 489 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 ASPRV1Q53RT3 343 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 WDR19Q8NEZ3 1342 aa16.38■□□□□ 0.21
CCHCR1-211ENST00000467553 LRRC37A2A6NM11 1700 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 DYNC1LI2O43237 492 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 PRC1O43663 620 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 SMPD1P17405 629 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 MCM5P33992 734 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 PSRC1Q6PGN9 363 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 ADGRF4Q8IZF3 695 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 DNERQ8NFT8 737 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 IGDCC4Q8TDY8 1250 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 ASTN1O14525 1302 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
CCHCR1-211ENST00000467553 CUL9Q8IWT3 2517 aa16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 RBM47A0AV96 593 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 EPHB4P54760 987 aa16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 FAM161BQ96MY7 647 aa16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 MTIF3Q9H2K0 278 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
CCHCR1-211ENST00000467553 LCTP09848 1927 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 CPT1AP50416 773 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 BEX3Q00994 111 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 ITGA7Q13683 1181 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 USH1GQ495M9 461 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 CXCL17Q6UXB2 119 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 RNF207Q6ZRF8 634 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
CCHCR1-211ENST00000467553 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms