RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MVKQ03426 396 aa5.88□□□□□ -1.47
VPS50-209ENST00000467326 RAB33AQ14088 237 aa5.88□□□□□ -1.47
VPS50-209ENST00000467326 COPS5Q92905 334 aa5.88□□□□□ -1.47
VPS50-209ENST00000467326 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
VPS50-209ENST00000467326 ZNF552Q9H707 407 aaPredicted RBP5.88□□□□□ -1.47
VPS50-209ENST00000467326 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 A0A1W2PQJ5 194 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 NUDT19A8MXV4 375 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 THBDP07204 575 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 TACR1P25103 407 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 BICRALQ6AI39 1079 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 LCNL1Q6ZST4 164 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 AMIGO3Q86WK7 504 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 PDLIM7Q9NR12 457 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
VPS50-209ENST00000467326 TTBK1Q5TCY1 1321 aaPredicted RBP5.87□□□□□ -1.47
VPS50-209ENST00000467326 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 ABLIM1O14639 778 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
VPS50-209ENST00000467326 SNRPB2P08579 225 aaKnown RBP5.86□□□□□ -1.47
VPS50-209ENST00000467326 PLS3P13797 630 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 GLDCP23378 1020 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 RBM10P98175 930 aaKnown RBP5.86□□□□□ -1.47
VPS50-209ENST00000467326 TMEM62Q0P6H9 643 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 CPNE8Q86YQ8 564 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 C1QL4Q86Z23 238 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
VPS50-209ENST00000467326 PPP1R1BQ9UD71 204 aaPredicted RBP5.86□□□□□ -1.47
VPS50-209ENST00000467326 TCAF2A6NFQ2 919 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 ETV2O00321 342 aaPredicted RBP5.85□□□□□ -1.47
VPS50-209ENST00000467326 SRGAP3O43295 1099 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 KRT1P04264 644 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 TMEM253P0C7T8 217 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 MED14OSP0DP75 135 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 VIPR1P32241 457 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 GTF2F1P35269 517 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-209ENST00000467326 YBX1P67809 324 aaKnown RBP5.85□□□□□ -1.47
VPS50-209ENST00000467326 SF3A1Q15459 793 aaKnown RBP5.85□□□□□ -1.47
VPS50-209ENST00000467326 PLEKHN1Q494U1 663 aaPredicted RBP5.85□□□□□ -1.47
VPS50-209ENST00000467326 NBPF6Q5VWK0 638 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 TMEM132EQ6IEE7 984 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 RPTNQ6XPR3 784 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 CABP7Q86V35 215 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 NBPF4Q96M43 638 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 GPRC5CQ9NQ84 441 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 GULP1Q9UBP9 304 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 RWDD3Q9Y3V2 267 aa5.85□□□□□ -1.47
VPS50-209ENST00000467326 NPHS1O60500 1241 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 CYBBP04839 570 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 DBHP09172 617 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 C1QTNF9P0C862 333 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 HOXC12P31275 282 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
VPS50-209ENST00000467326 ECI1P42126 302 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 CTSWP56202 376 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 PPP2R2AP63151 447 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 SRSF3P84103 164 aaKnown RBP5.84□□□□□ -1.47
VPS50-209ENST00000467326 CYP4F3Q08477 520 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 NR1I3Q14994 352 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 ATG14Q6ZNE5 492 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 TMC6Q7Z403 805 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 ST13P5Q8NFI4 369 aaPredicted RBP5.84□□□□□ -1.47
VPS50-209ENST00000467326 NLGN2Q8NFZ4 835 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 NPLOC4Q8TAT6 608 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 FRS2Q8WU20 508 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 ARMC5Q96C12 935 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 SIRT5Q9NXA8 310 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 KLHL14Q9P2G3 628 aa5.84□□□□□ -1.47
VPS50-209ENST00000467326 MBD1Q9UIS9 605 aaPredicted RBP5.84□□□□□ -1.47
VPS50-209ENST00000467326 C7orf72A4D263 438 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 IQCA1LA6NCM1 817 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 SCG5P05408 212 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 KCNJ6P48051 423 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 GFRA1P56159 465 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 DLG4P78352 724 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 KCNAB2Q13303 367 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 CIAPIN1Q6FI81 312 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 PAQR3Q6TCH7 311 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 LZTR1Q8N653 840 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 KCNN1Q92952 543 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 CCDC140Q96MF4 163 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 MMP19Q99542 508 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 HIRIP3Q9BW71 556 aaPredicted RBP5.83□□□□□ -1.48
VPS50-209ENST00000467326 SGPP1Q9BX95 441 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 CD320Q9NPF0 282 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 FBLN5Q9UBX5 448 aa5.83□□□□□ -1.48
VPS50-209ENST00000467326 A0A1W2PQU0 124 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 CCDC85CA6NKD9 419 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 MEFVO15553 781 aaPredicted RBP5.82□□□□□ -1.48
VPS50-209ENST00000467326 CPP00450 1065 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 GLI4P10075 376 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 MAPKAPK2P49137 400 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 SF1Q15637 639 aaKnown RBP5.82□□□□□ -1.48
VPS50-209ENST00000467326 PRSS53Q2L4Q9 553 aa5.82□□□□□ -1.48
VPS50-209ENST00000467326 ACBD5Q5T8D3 534 aaPredicted RBP5.82□□□□□ -1.48
VPS50-209ENST00000467326 E4F1Q66K89 784 aaPredicted RBP5.82□□□□□ -1.48
VPS50-209ENST00000467326 ZC3H14Q6PJT7 736 aaKnown RBP5.82□□□□□ -1.48
VPS50-209ENST00000467326 PPIL6Q8IXY8 311 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms