RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 H7C1D1 291 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 POLR2DO15514 142 aaKnown RBP10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 ACTN4O43707 911 aaKnown RBP10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 SLFN14P0C7P3 912 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 SLC16A2P36021 539 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 IQCB1Q15051 598 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 CDC37Q16543 378 aaPredicted RBP10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 NT5DC1Q5TFE4 455 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 SH3RF1Q7Z6J0 888 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 CEP57L1Q8IYX8 460 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 GPC2Q8N158 579 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 ACER1Q8TDN7 264 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 COA7Q96BR5 231 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 HOOK2Q96ED9 719 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 DNAJC25Q9H1X3 360 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 PSTPIP2Q9H939 334 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 GJA3Q9Y6H8 435 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.68
APOBEC1-202ENST00000467171 VWA3AA6NCI4 1184 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 CTNND1O60716 968 aaKnown RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 EGFRP00533 1210 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 SARSP49591 514 aaKnown RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 AP3B2Q13367 1082 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 IL17AQ16552 155 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 USP49Q70CQ1 688 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 APOBEC3FQ8IUX4 373 aaKnown RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 TRIML1Q8N9V2 468 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 SPATA20Q8TB22 786 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 TBCKQ8TEA7 893 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 SYMPKQ92797 1274 aaKnown RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 EPSTI1Q96J88 318 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 AK8Q96MA6 479 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 AMNQ9BXJ7 453 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 DEFB129Q9H1M3 183 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 GPRC5DQ9NZD1 345 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 BIN2Q9UBW5 565 aaPredicted RBP10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 SERTAD1Q9UHV2 236 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 PPP2R3BQ9Y5P8 575 aa10.82□□□□□ -0.68
APOBEC1-202ENST00000467171 TMEM232C9JQI7 657 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 OR52Z1P0C646 297 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 GCFC2P16383 781 aaKnown RBP10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 TXLNAP40222 546 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 ECE1P42892 770 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 STAT2P52630 851 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 PTPN5P54829 565 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 POSTNQ15063 836 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 E2F4Q16254 413 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 LETM2Q2VYF4 491 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 TBC1D10BQ4KMP7 808 aaPredicted RBP10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 JAKMIP3Q5VZ66 844 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 DCAF15Q66K64 600 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 SARM1Q6SZW1 724 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 MOXD1Q6UVY6 613 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 ARHGAP27Q6ZUM4 889 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 C11orf57Q6ZUT1 292 aaPredicted RBP10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 LUZP1Q86V48 1076 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 FBXO11Q86XK2 927 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 IQUBQ8NA54 791 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 CHURC1Q8WUH1 139 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 CCSER1Q9C0I3 900 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 TMEM60Q9H2L4 133 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 HACL1Q9UJ83 578 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 ZNF112Q9UJU3 913 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 FEM1BQ9UK73 627 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 PCDHA1Q9Y5I3 950 aa10.81□□□□□ -0.68
APOBEC1-202ENST00000467171 EDIL3O43854 480 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 NEMFO60524 1076 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 CCNT1O60563 726 aaKnown RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 SMC2O95347 1197 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 ADCY5O95622 1261 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 FOSP01100 380 aaPredicted RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 USP11P51784 963 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 PNOCQ13519 176 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 THSD4Q6ZMP0 1018 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 LPAR1Q92633 364 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 TRIM44Q96DX7 344 aaPredicted RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 MTMR9Q96QG7 549 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 NUP88Q99567 741 aaPredicted RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 FHDC1Q9C0D6 1143 aaPredicted RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 KIAA1683Q9H0B3 1180 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 TMEM260Q9NX78 707 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 PCDHA5Q9Y5H7 936 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 PITPNM2Q9BZ72 1349 aa10.8□□□□□ -0.68
APOBEC1-202ENST00000467171 CYP3A7-CYP3A51PA0A087WV96 503 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 A0A087X0B3 334 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 BECN2A8MW95 431 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 GOLGA6L19H0YKK7 550 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms