RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 TMEM260Q9NX78 707 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
NUP188-204ENST00000467044 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 KIF28PB7ZC32 967 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 MEIS2O14770 477 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 BCRP11274 1271 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
NUP188-204ENST00000467044 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
NUP188-204ENST00000467044 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
NUP188-204ENST00000467044 ANKRD35Q8N283 1001 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
NUP188-204ENST00000467044 R3HDMLQ9H3Y0 253 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
NUP188-204ENST00000467044 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 ADGRA2Q96PE1 1338 aa12.3□□□□□ -0.44
NUP188-204ENST00000467044 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP188-204ENST00000467044 RPS6P62753 249 aaKnown RBP12.29□□□□□ -0.44
NUP188-204ENST00000467044 RESTQ13127 1097 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 KCTD2Q14681 263 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 NOM1Q5C9Z4 860 aaKnown RBP12.29□□□□□ -0.44
NUP188-204ENST00000467044 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 KRT25Q7Z3Z0 450 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 NOSTRINQ8IVI9 506 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 MMP19Q99542 508 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
NUP188-204ENST00000467044 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
NUP188-204ENST00000467044 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 M0R2N6 131 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 PIK3CDO00329 1044 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 FOSP01100 380 aaPredicted RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 FCER1AP12319 257 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 MAPK4P31152 587 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 HSD17B4P51659 736 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
NUP188-204ENST00000467044 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 MCTP2Q6DN12 878 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 FAM173BQ6P4H8 233 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 BRAPQ7Z569 592 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 SYTL5Q8TDW5 730 aaPredicted RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 BEGAINQ9BUH8 593 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
NUP188-204ENST00000467044 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
NUP188-204ENST00000467044 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 MAP2K1Q02750 393 aaPredicted RBP12.27□□□□□ -0.45
NUP188-204ENST00000467044 AP3B2Q13367 1082 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 INF2Q27J81 1249 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 GPR142Q7Z601 462 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 TEX2Q8IWB9 1127 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 TNFRSF25Q93038 417 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 PURBQ96QR8 312 aaKnown RBP12.27□□□□□ -0.45
NUP188-204ENST00000467044 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 ANO3Q9BYT9 981 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 CYP39A1Q9NYL5 469 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 COL20A1Q9P218 1284 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.45
NUP188-204ENST00000467044 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 PFASO15067 1338 aa12.27□□□□□ -0.45
NUP188-204ENST00000467044 PLXNB2O15031 1838 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 STRNO43815 780 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 PGK2P07205 417 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 PTPREP23469 700 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 UBXN2AP68543 259 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 SP3Q02447 781 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 GHRHRQ02643 423 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 ARHGEF16Q5VV41 709 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 RMDN3Q96TC7 470 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 MAF1Q9H063 256 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
NUP188-204ENST00000467044 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 EIF2AK2P19525 551 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 ADORA2AP29274 412 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 ZNF76P36508 570 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 CNTN2Q02246 1040 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 KIF22Q14807 665 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 ZNF396Q96N95 335 aaPredicted RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
NUP188-204ENST00000467044 MYH7BA7E2Y1 1941 aa12.25□□□□□ -0.45
NUP188-204ENST00000467044 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms