RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 VTA1Q9NP79 307 aa20.31■□□□□ 0.84
CYTH3-205ENST00000466543 CXXC1Q9P0U4 656 aaPredicted RBP20.31■□□□□ 0.84
CYTH3-205ENST00000466543 NEDD4P46934 1319 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 LAMA4Q16363 1823 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 TLR3O15455 904 aaKnown RBP20.3■□□□□ 0.84
CYTH3-205ENST00000466543 B4GALT4O60513 344 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 WNT8AQ9H1J5 351 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 HIPK3Q9H422 1215 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 Q9Y3F1 56 aa20.3■□□□□ 0.84
CYTH3-205ENST00000466543 MYO9BQ13459 2157 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 CABYRO75952 493 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 SNHG28P0DPA3 235 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 DUSP28Q4G0W2 176 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 AKNAD1Q5T1N1 836 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 SMC5Q8IY18 1101 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 ZKSCAN3Q9BRR0 538 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 NOC4LQ9BVI4 516 aaKnown RBP20.29■□□□□ 0.84
CYTH3-205ENST00000466543 IL23AQ9NPF7 189 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 REV3LO60673 3130 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 MUC3AQ02505 3323 aa20.29■□□□□ 0.84
CYTH3-205ENST00000466543 PTPDC1A2A3K4 754 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 CALML3P27482 149 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 CCL23P55773 120 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 PPP1R13LQ8WUF5 828 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 WDR11Q9BZH6 1224 aa20.28■□□□□ 0.84
CYTH3-205ENST00000466543 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
CYTH3-205ENST00000466543 IGHDP01880 384 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 GOLGA8HP0CJ92 632 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 SDSP20132 328 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
CYTH3-205ENST00000466543 PSRC1Q6PGN9 363 aaPredicted RBP20.27■□□□□ 0.84
CYTH3-205ENST00000466543 MFSD6Q6ZSS7 791 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 TICAM2Q86XR7 235 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 HERVK_113Q902F9 699 aa20.27■□□□□ 0.84
CYTH3-205ENST00000466543 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
CYTH3-205ENST00000466543 SCN10AQ9Y5Y9 1956 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 SCN5AQ14524 2016 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 ZEB2O60315 1214 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 PURAQ00577 322 aaKnown RBP20.26■□□□□ 0.83
CYTH3-205ENST00000466543 RNF207Q6ZRF8 634 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 OTOP2Q7RTS6 562 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 TTC14Q96N46 770 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
CYTH3-205ENST00000466543 PRDM6Q9NQX0 595 aa20.26■□□□□ 0.83
CYTH3-205ENST00000466543 TRMT13Q9NUP7 481 aaKnown RBP20.26■□□□□ 0.83
CYTH3-205ENST00000466543 EDNRBP24530 442 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 COPS5Q92905 334 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 SCLYQ96I15 445 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 UBA5Q9GZZ9 404 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 PRDM12Q9H4Q4 367 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 YBX2Q9Y2T7 364 aaKnown RBP20.25■□□□□ 0.83
CYTH3-205ENST00000466543 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
CYTH3-205ENST00000466543 FGBP02675 491 aa20.24■□□□□ 0.83
CYTH3-205ENST00000466543 CYP2C9P11712 490 aa20.24■□□□□ 0.83
CYTH3-205ENST00000466543 ADGRE1Q14246 886 aa20.24■□□□□ 0.83
CYTH3-205ENST00000466543 TBC1D5Q92609 795 aa20.24■□□□□ 0.83
CYTH3-205ENST00000466543 LOC102724159A0A0B4J2E5 919 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 ARIH2O95376 493 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 MYL3P08590 195 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 PCP11498 1178 aaKnown RBP20.23■□□□□ 0.83
CYTH3-205ENST00000466543 NUCB1Q02818 461 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 PWP2Q15269 919 aaKnown RBP20.23■□□□□ 0.83
CYTH3-205ENST00000466543 USH1GQ495M9 461 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 OR6J1Q8NGC5 347 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 NKX2-4Q9H2Z4 354 aa20.23■□□□□ 0.83
CYTH3-205ENST00000466543 RBAK-RBAKDNI3L0D1 243 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 KDM4AO75164 1064 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 RABGGTBP53611 331 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 PDE4DQ08499 809 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 CWC27Q6UX04 472 aaKnown RBP20.22■□□□□ 0.83
CYTH3-205ENST00000466543 ESR2Q92731 530 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 IL25Q9H293 177 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 COL20A1Q9P218 1284 aa20.22■□□□□ 0.83
CYTH3-205ENST00000466543 B4E1Z4 1266 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 ZNF213O14771 459 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 MYOGP15173 224 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 NBPF20Q3BBV1 942 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 SEZ6LQ9BYH1 1024 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
CYTH3-205ENST00000466543 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 MYH6P13533 1939 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 TNKSO95271 1327 aa20.21■□□□□ 0.83
CYTH3-205ENST00000466543 CPT1AP50416 773 aa20.2■□□□□ 0.82
CYTH3-205ENST00000466543 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
CYTH3-205ENST00000466543 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
CYTH3-205ENST00000466543 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
CYTH3-205ENST00000466543 GPATCH4Q5T3I0 446 aaKnown RBP20.2■□□□□ 0.82
CYTH3-205ENST00000466543 ENAHQ8N8S7 591 aaPredicted RBP20.2■□□□□ 0.82
CYTH3-205ENST00000466543 PNMA1Q8ND90 353 aa20.2■□□□□ 0.82
CYTH3-205ENST00000466543 DNERQ8NFT8 737 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms