RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SCLYQ96I15 445 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 PTCHD1Q96NR3 888 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 AP5S1Q9NUS5 200 aa6.16□□□□□ -1.42
CDC42BPA-211ENST00000466538 TCRBV16S1A1N1A0A5B0 115 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 CRTAMO95727 393 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 IGFALSP35858 605 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 GTF2A2P52657 109 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 HLA-DQA1Q5Y7H0 255 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 UBE2R2Q712K3 238 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 PHF20Q9BVI0 1012 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 CDADC1Q9BWV3 514 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 BSDC1Q9NW68 430 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 CLEC1BQ9P126 229 aa6.15□□□□□ -1.42
CDC42BPA-211ENST00000466538 TMEM82A0PJX8 343 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 ARNTLO00327 626 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 OPA1O60313 960 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 CPEP16870 476 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 RPL10P27635 214 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 HOXA10P31260 410 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 GUCY1A3Q02108 690 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 MSMPQ1L6U9 139 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 PRSS36Q5K4E3 855 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 KCNT2Q6UVM3 1135 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 LBX2Q6XYB7 198 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 DDX46Q7L014 1031 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 RNF180Q86T96 592 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 ANKLE2Q86XL3 938 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 FCRL2Q96LA5 508 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 TARS2Q9BW92 718 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 TNFRSF10DQ9UBN6 386 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 TMEFF2Q9UIK5 374 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 TRAF6Q9Y4K3 522 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 ASXL2Q76L83 1435 aa6.14□□□□□ -1.43
CDC42BPA-211ENST00000466538 MYO1BO43795 1136 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 FKTNO75072 461 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 COBLO75128 1261 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 TGFB1P01137 390 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 CNGA1P29973 690 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 PAK1Q13153 545 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 KIZQ2M2Z5 673 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 CT47A1Q5JQC4 288 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 CCDC103Q8IW40 242 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 RCBTB1Q8NDN9 531 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 ORAI3Q9BRQ5 295 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 ALG1Q9BT22 464 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 PCDHA9Q9Y5H5 950 aa6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 TNPO3Q9Y5L0 923 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-211ENST00000466538 ARVCFO00192 962 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 WNT9AO14904 365 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 GSTA4O15217 222 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 NPHS1O60500 1241 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 PRNPP04156 253 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 NEK4P51957 841 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 NFKB2Q00653 900 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 DUSP4Q13115 394 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 CFAP100Q494V2 611 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 DDX53Q86TM3 631 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 MTDHQ86UE4 582 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 KIF18BQ86Y91 864 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 TMEM52Q8NDY8 209 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 NLGN2Q8NFZ4 835 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 BCL7CQ8WUZ0 217 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 CCDC120Q96HB5 630 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 ERVK13-1Q9NX77 482 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 SLC5A6Q9Y289 635 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 ATP8A1Q9Y2Q0 1164 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 TIMM13Q9Y5L4 95 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-211ENST00000466538 A0A1W2PQ45 241 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 A0A1W2PQY0 241 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 C7orf72A4D263 438 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 FAM83GA6ND36 823 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 RASGRP1O95267 797 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 JMJD7P0C870 316 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 KCNA6P17658 529 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 KIR2DL1P43626 348 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 KIR2DL2P43627 348 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 IKZF1Q13422 519 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 LSAMPQ13449 338 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 ANGEL2Q5VTE6 544 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 ZCCHC8Q6NZY4 707 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 CPNE8Q86YQ8 564 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 WNK4Q96J92 1243 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 MTFR1LQ9H019 292 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 TYW1Q9NV66 732 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 ADGRE2Q9UHX3 823 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 MCM8Q9UJA3 840 aa6.11□□□□□ -1.43
CDC42BPA-211ENST00000466538 FAM47E-STBD1D6RA91 191 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 MSCO60682 206 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 LCP1P13796 627 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms