RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 AK8Q96MA6 479 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 RHOXF2Q9BQY4 288 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 THAP9Q9H5L6 903 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 TBC1D8O95759 1140 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 IDEP14735 1019 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 KIAA0895Q8NCT3 520 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 CCDC47Q96A33 483 aaKnown RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 NCAPH2Q6IBW4 605 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 KCTD1Q719H9 257 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 CERS5Q8N5B7 392 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 TBC1D22AQ8WUA7 517 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 DHTKD1Q96HY7 919 aaPredicted RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 CDK5RAP3Q96JB5 506 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 ARFGAP3Q9NP61 516 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
UFD1-206ENST00000466373 HDAC6Q9UBN7 1215 aa11.65□□□□□ -0.54
UFD1-206ENST00000466373 GAKO14976 1311 aa11.65□□□□□ -0.55
UFD1-206ENST00000466373 MYL1P05976 194 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 CCNE1P24864 410 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 NT5C2P49902 561 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 DNM2P50570 870 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 ADCY7P51828 1080 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
UFD1-206ENST00000466373 RIOX1Q9H6W3 641 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 ERICH4A6NGS2 130 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 MYMKA6NI61 221 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 FAM196BA6NMK8 535 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 GRB10Q13322 594 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 SV2BQ7L1I2 683 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 SEMA6BQ9H3T3 888 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 BLOC1S4Q9NUP1 217 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
UFD1-206ENST00000466373 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 EDIL3O43854 480 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SRGNP10124 158 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 ADRA2BP18089 450 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 CACNB3P54284 484 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 AMPD3Q01432 767 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 CYP27A1Q02318 531 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 LRRC41Q15345 812 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 CCDC96Q2M329 555 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
UFD1-206ENST00000466373 CCDC122Q5T0U0 273 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 PNKPQ96T60 521 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 DNAJC7Q99615 494 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 ANKZF1Q9H8Y5 726 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 LY75O60449 1722 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
UFD1-206ENST00000466373 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
UFD1-206ENST00000466373 TRIM37O94972 964 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 HERVK_113P62684 666 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 KCNK18Q7Z418 384 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 KIAA1328Q86T90 577 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SNX29Q8TEQ0 813 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 MTMR9Q96QG7 549 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
UFD1-206ENST00000466373 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SUGCTQ9HAC7 445 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 PODXL2Q9NZ53 605 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SERPINB13Q9UIV8 391 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 BICDL2A1A5D9 508 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 ZBTB22O15209 634 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 MARCH6O60337 910 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 SRGAP2O75044 1071 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 NFIAQ12857 509 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 LARP4BQ92615 738 aaKnown RBP11.63□□□□□ -0.55
UFD1-206ENST00000466373 DUSP10Q9Y6W6 482 aa11.63□□□□□ -0.55
UFD1-206ENST00000466373 UTRNP46939 3433 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 POLRMTO00411 1230 aaKnown RBP11.62□□□□□ -0.55
UFD1-206ENST00000466373 TTLL1O95922 423 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 SSBP05455 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
UFD1-206ENST00000466373 PLEKP08567 350 aaPredicted RBP11.62□□□□□ -0.55
UFD1-206ENST00000466373 GABPAQ06546 454 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 TCP10Q12799 353 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 CNNM4Q6P4Q7 775 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms