RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PNMA3Q9UL41 463 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SLC45A1Q9Y2W3 748 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 AFG3L2Q9Y4W6 797 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 CTDP1Q9Y5B0 961 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ZHX2Q9Y6X8 837 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ASTN2O75129 1339 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 PAPPA2Q9BXP8 1791 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 DOCK1Q14185 1865 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 MYH4Q9Y623 1939 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 VPS37CA5D8V6 355 aaPredicted RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 DDX11L8A8MPP1 907 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 TMEM232C9JQI7 657 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 ADM5C9JUS6 153 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 RAD21O60216 631 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 JAK2O60674 1132 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 PLEKHA8P1O95397 391 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 F13A1P00488 732 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 MMP1P03956 469 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 FDPSP14324 419 aaKnown RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 RXRAP19793 462 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 HOXA7P31268 230 aaPredicted RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 INPP5BP32019 993 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 TRAPPC10P48553 1259 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 GTF2A2P52657 109 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 MRPL12P52815 198 aaKnown RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 PRSS12P56730 875 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 INHBEP58166 350 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 KRT85P78386 507 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 FSTL1Q12841 308 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 SPP2Q13103 211 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 VGLL4Q14135 290 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 SYDE2Q5VT97 1194 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 TRIM46Q7Z4K8 759 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 ADGRF4Q8IZF3 695 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 PHKBQ93100 1093 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 DDX11Q96FC9 970 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 HHIPL1Q96JK4 782 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 AMNQ9BXJ7 453 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 ZMYND12Q9H0C1 365 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 ZCCHC17Q9NP64 241 aaKnown RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 KCNH4Q9UQ05 1017 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 MTMR6Q9Y217 621 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 RABGAP1Q9Y3P9 1069 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
CHMP3-206ENST00000466032 MORC2Q9Y6X9 1032 aaPredicted RBP6.9□□□□□ -1.3
CHMP3-206ENST00000466032 A0A1W2PRG0 241 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 WNT7AO00755 349 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 ZBED4O75132 1171 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 TOMM70O94826 608 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 FOSP01100 380 aaPredicted RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 CETPP11597 493 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 NCLP19338 710 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 KRT2P35908 639 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 NLRP5P59047 1200 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 SNAPC2Q13487 334 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 RRP1BQ14684 758 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 COG2Q14746 738 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 PKN1Q16512 942 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 KRT40Q6A162 431 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 LBX2Q6XYB7 198 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 FBXO11Q86XK2 927 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 MCF2L2Q86YR7 1114 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 STAG2Q8N3U4 1231 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 JMYQ8N9B5 988 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 ZKSCAN4Q969J2 545 aaPredicted RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 SLF1Q9BQI6 1058 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 PHF20Q9BVI0 1012 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 JMJD4Q9H9V9 463 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 ISY1Q9ULR0 285 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 NOL7Q9UMY1 257 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 MRPL11Q9Y3B7 192 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 SSC5DA1L4H1 1573 aa6.89□□□□□ -1.31
CHMP3-206ENST00000466032 POLR2AP24928 1970 aaKnown RBP6.89□□□□□ -1.31
CHMP3-206ENST00000466032 ABCB11O95342 1321 aa6.88□□□□□ -1.31
CHMP3-206ENST00000466032 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
CHMP3-206ENST00000466032 CYTH3O43739 400 aa6.88□□□□□ -1.31
CHMP3-206ENST00000466032 CELF2O95319 508 aaKnown RBP6.88□□□□□ -1.31
CHMP3-206ENST00000466032 VCAM1P19320 739 aa6.88□□□□□ -1.31
CHMP3-206ENST00000466032 OSBPP22059 807 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms