RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 TRIM32Q13049 653 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 PFKFB3Q16875 520 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-203ENST00000465941 SLC30A10Q6XR72 485 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 NOL8Q76FK4 1167 aaKnown RBP21.23■□□□□ 0.99
HOXA9-203ENST00000465941 ZNF713Q8N859 430 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-203ENST00000465941 PHKBQ93100 1093 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 TINF2Q9BSI4 451 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 SMCHD1A6NHR9 2005 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 LOC102724159A0A0B4J2E5 919 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 ST18O60284 1047 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 CFBP00751 764 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 CALML3P27482 149 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 CYP2C19P33261 490 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 AKAP17AQ02040 695 aaKnown RBP21.22■□□□□ 0.99
HOXA9-203ENST00000465941 CACNB2Q08289 660 aaPredicted RBP21.22■□□□□ 0.99
HOXA9-203ENST00000465941 PWP2Q15269 919 aaKnown RBP21.22■□□□□ 0.99
HOXA9-203ENST00000465941 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 ADD3Q9UEY8 706 aaKnown RBP21.22■□□□□ 0.99
HOXA9-203ENST00000465941 SYNGAP1Q96PV0 1343 aa21.22■□□□□ 0.99
HOXA9-203ENST00000465941 ZNFX1Q9P2E3 1918 aaKnown RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 ASB14A6NK59 587 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 CDKL5O76039 1030 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 LARGE1O95461 756 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 SCG2P13521 617 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 PRKAR2AP13861 404 aaKnown RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 PKN1Q16512 942 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 WWC2Q6AWC2 1192 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 TRIM22Q8IYM9 498 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 DNERQ8NFT8 737 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 SYTL5Q8TDW5 730 aaPredicted RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 PURBQ96QR8 312 aaKnown RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 SLC26A6Q9BXS9 759 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 BARHL2Q9NY43 387 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 NRBP1Q9UHY1 535 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 BAZ2BQ9UIF8 2168 aaKnown RBP21.21■□□□□ 0.99
HOXA9-203ENST00000465941 ASTN1O14525 1302 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 RPTORQ8N122 1335 aa21.21■□□□□ 0.99
HOXA9-203ENST00000465941 GCOM1H8Y6P7 765 aaPredicted RBP21.2■□□□□ 0.98
HOXA9-203ENST00000465941 POLR2MP0CAP2 368 aa21.2■□□□□ 0.98
HOXA9-203ENST00000465941 CCL5P13501 91 aa21.2■□□□□ 0.98
HOXA9-203ENST00000465941 MTFR1Q15390 333 aa21.2■□□□□ 0.98
HOXA9-203ENST00000465941 NECAB1Q8N987 351 aa21.2■□□□□ 0.98
HOXA9-203ENST00000465941 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.98
HOXA9-203ENST00000465941 GTF3C6Q969F1 213 aa21.2■□□□□ 0.98
HOXA9-203ENST00000465941 HMX1Q9NP08 348 aaPredicted RBP21.2■□□□□ 0.98
HOXA9-203ENST00000465941 STXBP3O00186 592 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 SNAI1O95863 264 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-203ENST00000465941 PPP1R18Q6NYC8 613 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 TEX2Q8IWB9 1127 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 MORC4Q8TE76 937 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 UNC93B1Q9H1C4 597 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 PSTPIP2Q9H939 334 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 SH2B1Q9NRF2 756 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-203ENST00000465941 COL20A1Q9P218 1284 aa21.19■□□□□ 0.98
HOXA9-203ENST00000465941 MYH6P13533 1939 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 PPFIA3O75145 1194 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 CYBAP13498 195 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 ALDH5A1P51649 535 aaPredicted RBP21.18■□□□□ 0.98
HOXA9-203ENST00000465941 NAPAP54920 295 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 TYW1BQ6NUM6 668 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 ARMCX2Q7L311 632 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 TAAR1Q96RJ0 339 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 RNF208Q9H0X6 261 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 PAK6Q9NQU5 681 aaPredicted RBP21.18■□□□□ 0.98
HOXA9-203ENST00000465941 CNPY2Q9Y2B0 182 aa21.18■□□□□ 0.98
HOXA9-203ENST00000465941 B4DLN1 442 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 MEIS2O14770 477 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 DEXIO95424 95 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 MYCP01106 439 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 HOXA13P31271 388 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 MCM2P49736 904 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 MRPL12P52815 198 aaKnown RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 TRPV1Q8NER1 839 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 NSUN6Q8TEA1 469 aaKnown RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 CUL5Q93034 780 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 MPHOSPH6Q99547 160 aaKnown RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 TMEM106CQ9BVX2 250 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 ABHD16BQ9H3Z7 469 aa21.17■□□□□ 0.98
HOXA9-203ENST00000465941 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-203ENST00000465941 PLXNA1Q9UIW2 1896 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 STK36Q9NRP7 1315 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 CCDC85CA6NKD9 419 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 GJB1P08034 283 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 EDNRBP24530 442 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 CCND3P30281 292 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-203ENST00000465941 PRAMEF19Q5SWL8 479 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 CCDC12Q8WUD4 166 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-203ENST00000465941 IWS1Q96ST2 819 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 RMDN3Q96TC7 470 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.16■□□□□ 0.98
HOXA9-203ENST00000465941 GLT8D2Q9H1C3 349 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 RIC8AQ9NPQ8 531 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 SH3GLB2Q9NR46 395 aa21.16■□□□□ 0.98
HOXA9-203ENST00000465941 ESYT2A0FGR8 921 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 SMCO2A6NFE2 343 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 ZNF865P0CJ78 1059 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms