RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CXorf38Q8TB03 319 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 KRTAP4-11Q9BYQ6 195 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 RNF38Q9H0F5 515 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 CGGBP1Q9UFW8 167 aaPredicted RBP8.7□□□□□ -1.02
SMC4-205ENST00000465563 C2orf71A6NGG8 1288 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 FFAR3O14843 346 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 GLI4P10075 376 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 GJA8P48165 433 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 FOXO4P98177 505 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 AMPD2Q01433 879 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 ARHGEF39Q8N4T4 335 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 LZTR1Q8N653 840 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 CPLX3Q8WVH0 158 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 KLHL6Q8WZ60 621 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 RCC1LQ96I51 464 aaKnown RBP8.69□□□□□ -1.02
SMC4-205ENST00000465563 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 SUGT1Q9Y2Z0 365 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 BACE2Q9Y5Z0 518 aa8.69□□□□□ -1.02
SMC4-205ENST00000465563 NCAM1P13591 858 aa8.68□□□□□ -1.02
SMC4-205ENST00000465563 ATF2P15336 505 aa8.68□□□□□ -1.02
SMC4-205ENST00000465563 NASPP49321 788 aaPredicted RBP8.68□□□□□ -1.02
SMC4-205ENST00000465563 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
SMC4-205ENST00000465563 GRB10Q13322 594 aa8.68□□□□□ -1.02
SMC4-205ENST00000465563 ERICH6BQ5W0A0 696 aa8.68□□□□□ -1.02
SMC4-205ENST00000465563 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
SMC4-205ENST00000465563 SHDQ96IW2 340 aa8.67□□□□□ -1.02
SMC4-205ENST00000465563 SUSD2Q9UGT4 822 aa8.67□□□□□ -1.02
SMC4-205ENST00000465563 RWDD3Q9Y3V2 267 aa8.67□□□□□ -1.02
SMC4-205ENST00000465563 TRBV23OR9-2A0A075B6M9 112 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 PAMP19021 973 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 KCNC1P48547 511 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 CASP7P55210 303 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 KIAA1211LQ6NV74 962 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 FNIP1Q8TF40 1166 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 ALG3Q92685 438 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 TEPSINQ96N21 525 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 PMF1-BGLAPU3KQ54 211 aa8.66□□□□□ -1.02
SMC4-205ENST00000465563 NPHP3-ACAD11A0A0J9YXS1 232 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 ASGR2P07307 311 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 SLURP1P55000 103 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 RBM10P98175 930 aaKnown RBP8.65□□□□□ -1.02
SMC4-205ENST00000465563 FRMD5Q7Z6J6 570 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 CPNE8Q86YQ8 564 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 NETO2Q8NC67 525 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 TSPAN17Q96FV3 270 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 PEX11GQ96HA9 241 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 SEC16BQ96JE7 1060 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 KRTAP9-3Q9BYQ3 159 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 RXFP1Q9HBX9 757 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 NUDT5Q9UKK9 219 aa8.65□□□□□ -1.02
SMC4-205ENST00000465563 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
SMC4-205ENST00000465563 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
SMC4-205ENST00000465563 SLC9A5Q14940 896 aa8.64□□□□□ -1.03
SMC4-205ENST00000465563 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
SMC4-205ENST00000465563 USP33Q8TEY7 942 aa8.64□□□□□ -1.03
SMC4-205ENST00000465563 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
SMC4-205ENST00000465563 GULP1Q9UBP9 304 aa8.64□□□□□ -1.03
SMC4-205ENST00000465563 AKT3Q9Y243 479 aa8.64□□□□□ -1.03
SMC4-205ENST00000465563 PPP1R11O60927 126 aaPredicted RBP8.63□□□□□ -1.03
SMC4-205ENST00000465563 MC3RP41968 323 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 HTRA3P83110 453 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 VWA3BQ502W6 1294 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 B3GNT8Q7Z7M8 397 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 ADAM7Q9H2U9 754 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 FBLN5Q9UBX5 448 aa8.63□□□□□ -1.03
SMC4-205ENST00000465563 NPHS1O60500 1241 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 CELA3BP08861 270 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 PMLP29590 882 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 SKOR2Q2VWA4 1001 aaPredicted RBP8.62□□□□□ -1.03
SMC4-205ENST00000465563 SAPCD2Q86UD0 394 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 CRACR2BQ8N4Y2 399 aaPredicted RBP8.62□□□□□ -1.03
SMC4-205ENST00000465563 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
SMC4-205ENST00000465563 APBA2Q99767 749 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 STRIP2Q9ULQ0 834 aa8.62□□□□□ -1.03
SMC4-205ENST00000465563 ZBTB7AO95365 584 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 NAT2P11245 290 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 POMZP3Q6PJE2 187 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 LIPIQ6XZB0 460 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 ADGRG2Q8IZP9 1017 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 FAM169BQ8N8A8 192 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 BCAS3Q9H6U6 928 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMC4-205ENST00000465563 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 EMC9Q9Y3B6 208 aa8.61□□□□□ -1.03
SMC4-205ENST00000465563 C7orf72A4D263 438 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 KCNH1O95259 989 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 WWC2Q6AWC2 1192 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 BVESQ8NE79 360 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
SMC4-205ENST00000465563 CPA5Q8WXQ8 436 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 INPP5FQ9Y2H2 1132 aa8.6□□□□□ -1.03
SMC4-205ENST00000465563 A0A1B0GTL3 188 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 FUCA1P04066 466 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 ZNF143P52747 638 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms