RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-215ENST00000465457 HCN4Q9Y3Q4 1203 aa16.06■□□□□ 0.16
HDAC6-215ENST00000465457 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 STX6O43752 255 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 DHX16O60231 1041 aaKnown RBP16.05■□□□□ 0.16
HDAC6-215ENST00000465457 PFKFB2O60825 505 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 ASGR1P07306 291 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 AKR1B1P15121 316 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 GJB2P29033 226 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 OTOP2Q7RTS6 562 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 HERVK_113Q902F9 699 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 ZNF214Q9UL59 606 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-215ENST00000465457 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 PTPRSQ13332 1948 aa16.05■□□□□ 0.16
HDAC6-215ENST00000465457 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-215ENST00000465457 EPOPA6NHQ4 379 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 PRC1O43663 620 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 POLR3DP05423 398 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-215ENST00000465457 C6orf222P0C671 652 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-215ENST00000465457 ZSCAN22P10073 491 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-215ENST00000465457 PTGS1P23219 599 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 HAND2P61296 217 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 HMGN5P82970 282 aaKnown RBP16.04■□□□□ 0.16
HDAC6-215ENST00000465457 KCTD2Q14681 263 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 TMEM199Q8N511 208 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 REPS2Q8NFH8 660 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 SDR42E1Q8WUS8 393 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 VWCEQ96DN2 955 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 TCEANC2Q96MN5 208 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 GLT1D1Q96MS3 346 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 IL23AQ9NPF7 189 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
HDAC6-215ENST00000465457 SLC25A27O95847 323 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-215ENST00000465457 ICA1Q05084 483 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 PKP1Q13835 747 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
HDAC6-215ENST00000465457 TMEM179Q6ZVK1 233 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 CRNKL1Q9BZJ0 848 aaKnown RBP16.03■□□□□ 0.16
HDAC6-215ENST00000465457 EPB41L4AQ9HCS5 686 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-215ENST00000465457 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
HDAC6-215ENST00000465457 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
HDAC6-215ENST00000465457 ELP1O95163 1332 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 MROH7Q68CQ1 1323 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 ARVCFO00192 962 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 CTAGE5O15320 804 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 TRAK2O60296 914 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 CD4P01730 458 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 SYT1P21579 422 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 ST3GAL1Q11201 340 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
HDAC6-215ENST00000465457 CCDC174Q6PII3 467 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 FGD4Q96M96 766 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 WNT8AQ9H1J5 351 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 CERS4Q9HA82 394 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 TMX2Q9Y320 296 aa16.02■□□□□ 0.16
HDAC6-215ENST00000465457 WDFY4Q6ZS81 3184 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-215ENST00000465457 VWA5AO00534 786 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
HDAC6-215ENST00000465457 ARHGEF15O94989 841 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 STAT3P40763 770 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 CCL23P55773 120 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 BEX3Q00994 111 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 GSE1Q14687 1217 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 TMEM31Q5JXX7 168 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 ALYREFQ86V81 257 aaKnown RBP16.01■□□□□ 0.15
HDAC6-215ENST00000465457 TBC1D10CQ8IV04 446 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
HDAC6-215ENST00000465457 FAM184BQ9ULE4 1060 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
HDAC6-215ENST00000465457 LCTP09848 1927 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 MYH4Q9Y623 1939 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 TANC1Q9C0D5 1861 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 CYP2D7A0A087X1C5 515 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
HDAC6-215ENST00000465457 FGBP02675 491 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 SLC3A2P08195 630 aaKnown RBP16■□□□□ 0.15
HDAC6-215ENST00000465457 SPRED2Q7Z698 418 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
HDAC6-215ENST00000465457 TSPYL2Q9H2G4 693 aaPredicted RBP16■□□□□ 0.15
HDAC6-215ENST00000465457 CD320Q9NPF0 282 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 ARPP21Q9UBL0 812 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms