RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 SMTNL1A8MU46 457 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
COL5A1-205ENST00000464187 VCAM1P19320 739 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-205ENST00000464187 PPP1R18Q6NYC8 613 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 USP49Q70CQ1 688 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 FBXO11Q86XK2 927 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 HSD3B7Q9H2F3 369 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
COL5A1-205ENST00000464187 C19orf81C9J6K1 198 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 PRR29P0C7W0 189 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 HMGCS2P54868 508 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 TPM4P67936 248 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 ARID5BQ14865 1188 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 POSTNQ15063 836 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 CCDC194A0A1B0GVG4 234 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 TRAF5O00463 557 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 BMP15O95972 392 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 UQCRHP07919 91 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 ADCY7P51828 1080 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 USH1GQ495M9 461 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 LRRC8AQ8IWT6 810 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
COL5A1-205ENST00000464187 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 RANBP17Q9H2T7 1088 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 HOOK1Q9UJC3 728 aaKnown RBP16.45■□□□□ 0.22
COL5A1-205ENST00000464187 BMP6P22004 513 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 ZNF174Q15697 407 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-205ENST00000464187 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 CUL5Q93034 780 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 CLMNQ96JQ2 1002 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 PSTPIP2Q9H939 334 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 ELP3Q9H9T3 547 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 NMRK2Q9NPI5 230 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 RIC8AQ9NPQ8 531 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 IFNKQ9P0W0 207 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-205ENST00000464187 MAN1B1Q9UKM7 699 aa16.44■□□□□ 0.22
COL5A1-205ENST00000464187 A0A087X0B3 334 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 FLOT1O75955 427 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 SMC2O95347 1197 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 TRAPPC10P48553 1259 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 MYL5Q02045 173 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL5A1-205ENST00000464187 CCDC174Q6PII3 467 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 PDILTQ8N807 584 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
COL5A1-205ENST00000464187 FERMT2Q96AC1 680 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
COL5A1-205ENST00000464187 NEMFO60524 1076 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
COL5A1-205ENST00000464187 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
COL5A1-205ENST00000464187 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
COL5A1-205ENST00000464187 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
COL5A1-205ENST00000464187 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 KRT25Q7Z3Z0 450 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 TMOD4Q9NZQ9 345 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 FANCCQ00597 558 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 PPATQ06203 517 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 INF2Q27J81 1249 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 ERO1BQ86YB8 467 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
COL5A1-205ENST00000464187 EPSTI1Q96J88 318 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
COL5A1-205ENST00000464187 SPDYE5A6NIY4 337 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 IRF6O14896 467 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 ATP1A3P13637 1013 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
COL5A1-205ENST00000464187 CCZ1BP86790 482 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-205ENST00000464187 TRAF1Q13077 416 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 PTGDRQ13258 359 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL5A1-205ENST00000464187 UBE2SQ16763 222 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms