RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 OTUD7AQ8TE49 926 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-210ENST00000464078 PPM1EQ8WY54 764 aa20.44■□□□□ 0.86
HMGN1-210ENST00000464078 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
HMGN1-210ENST00000464078 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
HMGN1-210ENST00000464078 SLC4A7Q9Y6M7 1214 aa20.44■□□□□ 0.86
HMGN1-210ENST00000464078 MX1P20591 662 aa20.43■□□□□ 0.86
HMGN1-210ENST00000464078 MRPS5P82675 430 aaKnown RBP20.43■□□□□ 0.86
HMGN1-210ENST00000464078 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
HMGN1-210ENST00000464078 KIAA1211Q6ZU35 1233 aa20.43■□□□□ 0.86
HMGN1-210ENST00000464078 ADAMTS19Q8TE59 1207 aa20.43■□□□□ 0.86
HMGN1-210ENST00000464078 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
HMGN1-210ENST00000464078 RBM47A0AV96 593 aaKnown RBP20.42■□□□□ 0.86
HMGN1-210ENST00000464078 SUPT20HL2P0C7V6 817 aa20.42■□□□□ 0.86
HMGN1-210ENST00000464078 CPT1AP50416 773 aa20.42■□□□□ 0.86
HMGN1-210ENST00000464078 ALDH5A1P51649 535 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-210ENST00000464078 PURAQ00577 322 aaKnown RBP20.42■□□□□ 0.86
HMGN1-210ENST00000464078 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
HMGN1-210ENST00000464078 PPP2R2DQ66LE6 453 aa20.42■□□□□ 0.86
HMGN1-210ENST00000464078 CHMP4CQ96CF2 233 aa20.42■□□□□ 0.86
HMGN1-210ENST00000464078 PURBQ96QR8 312 aaKnown RBP20.42■□□□□ 0.86
HMGN1-210ENST00000464078 NFIBO00712 420 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
HMGN1-210ENST00000464078 IGFBP4P22692 258 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 BAATQ14032 418 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-210ENST00000464078 ALX1Q15699 326 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 WDR11Q9BZH6 1224 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 INCENPQ9NQS7 918 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 PNMA2Q9UL42 364 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 TNKSO95271 1327 aa20.41■□□□□ 0.86
HMGN1-210ENST00000464078 ATP2A2P16615 1042 aaKnown RBP20.4■□□□□ 0.86
HMGN1-210ENST00000464078 SCN5AQ14524 2016 aa20.4■□□□□ 0.86
HMGN1-210ENST00000464078 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
HMGN1-210ENST00000464078 SCLYQ96I15 445 aa20.4■□□□□ 0.86
HMGN1-210ENST00000464078 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
HMGN1-210ENST00000464078 PRRC2BQ5JSZ5 2229 aaKnown RBP20.39■□□□□ 0.86
HMGN1-210ENST00000464078 XIRP2A4UGR9 3374 aa20.39■□□□□ 0.86
HMGN1-210ENST00000464078 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
HMGN1-210ENST00000464078 RABGGTBP53611 331 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 CCDC85BQ15834 202 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-210ENST00000464078 VPS53Q5VIR6 699 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 MTG1Q9BT17 334 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-210ENST00000464078 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
HMGN1-210ENST00000464078 WDR19Q8NEZ3 1342 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 RAD50Q92878 1312 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 PITPNM1O00562 1244 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 NKRFO15226 690 aaKnown RBP eCLIP20.38■□□□□ 0.85
HMGN1-210ENST00000464078 POU3F3P20264 500 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-210ENST00000464078 EDNRBP24530 442 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 RFC2P35250 354 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 SLC16A2P36021 539 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 TTLL4Q14679 1199 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 SLC30A10Q6XR72 485 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 UHRF1Q96T88 793 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-210ENST00000464078 TMEM47Q9BQJ4 181 aa20.38■□□□□ 0.85
HMGN1-210ENST00000464078 TSPYL2Q9H2G4 693 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-210ENST00000464078 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 A6NJR5 290 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 CYP2C9P11712 490 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 MYOGP15173 224 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 COL9A1P20849 921 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 BRDTQ58F21 947 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-210ENST00000464078 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 OR6J1Q8NGC5 347 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 SCFD2Q8WU76 684 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
HMGN1-210ENST00000464078 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 MTMR7Q9Y216 660 aa20.37■□□□□ 0.85
HMGN1-210ENST00000464078 KPNA6O60684 536 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 MYL3P08590 195 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 PDHBP11177 359 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 ACTN1P12814 892 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 PTPN11Q06124 597 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-210ENST00000464078 RNF207Q6ZRF8 634 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 DNERQ8NFT8 737 aa20.36■□□□□ 0.85
HMGN1-210ENST00000464078 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-210ENST00000464078 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-210ENST00000464078 CA3P07451 260 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 SNHG28P0DPA3 235 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 PDE4DQ08499 809 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 NBPF20Q3BBV1 942 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 TMEM67Q5HYA8 995 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 PHOSPHO2Q8TCD6 241 aa20.35■□□□□ 0.85
HMGN1-210ENST00000464078 FGAP02671 866 aa20.34■□□□□ 0.85
HMGN1-210ENST00000464078 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
HMGN1-210ENST00000464078 CALML3P27482 149 aa20.34■□□□□ 0.85
HMGN1-210ENST00000464078 RPS6P62753 249 aaKnown RBP20.34■□□□□ 0.85
HMGN1-210ENST00000464078 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
HMGN1-210ENST00000464078 AAK1Q2M2I8 961 aa20.34■□□□□ 0.85
HMGN1-210ENST00000464078 MAF1Q9H063 256 aa20.34■□□□□ 0.85
HMGN1-210ENST00000464078 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms