RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 TMEM106CQ9BVX2 250 aa22.49■■□□□ 1.19
BCAS4-204ENST00000463943 HMX1Q9NP08 348 aaPredicted RBP22.49■■□□□ 1.19
BCAS4-204ENST00000463943 TPCN1Q9ULQ1 816 aa22.49■■□□□ 1.19
BCAS4-204ENST00000463943 DDX49Q9Y6V7 483 aaKnown RBP22.49■■□□□ 1.19
BCAS4-204ENST00000463943 RPTORQ8N122 1335 aa22.49■■□□□ 1.19
BCAS4-204ENST00000463943 POTEFA5A3E0 1075 aa22.48■■□□□ 1.19
BCAS4-204ENST00000463943 CFBP00751 764 aa22.48■■□□□ 1.19
BCAS4-204ENST00000463943 V9GY48 417 aaPredicted RBP22.48■■□□□ 1.19
BCAS4-204ENST00000463943 KIAA0100Q14667 2235 aaKnown RBP22.48■■□□□ 1.19
BCAS4-204ENST00000463943 ANKRD1Q15327 319 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 ZNF467Q7Z7K2 595 aaPredicted RBP22.47■■□□□ 1.19
BCAS4-204ENST00000463943 MCF2L2Q86YR7 1114 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 TRPV1Q8NER1 839 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.47■■□□□ 1.19
BCAS4-204ENST00000463943 MCM3APO60318 1980 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 CYBAP13498 195 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 TRAF1Q13077 416 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 NTRK3Q16288 839 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 MAMDC4Q6UXC1 1216 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 RGS22Q8NE09 1264 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 GPKOWQ92917 476 aaPredicted RBP eCLIP22.47■■□□□ 1.19
BCAS4-204ENST00000463943 PHKBQ93100 1093 aa22.47■■□□□ 1.19
BCAS4-204ENST00000463943 PAK6Q9NQU5 681 aaPredicted RBP22.47■■□□□ 1.19
BCAS4-204ENST00000463943 CNGA1P29973 690 aa22.46■■□□□ 1.19
BCAS4-204ENST00000463943 ARMCX2Q7L311 632 aa22.46■■□□□ 1.19
BCAS4-204ENST00000463943 HEATR3Q7Z4Q2 680 aa22.46■■□□□ 1.19
BCAS4-204ENST00000463943 MSL3Q8N5Y2 521 aaKnown RBP22.46■■□□□ 1.19
BCAS4-204ENST00000463943 DEFB118Q96PH6 123 aa22.46■■□□□ 1.19
BCAS4-204ENST00000463943 COL20A1Q9P218 1284 aa22.46■■□□□ 1.19
BCAS4-204ENST00000463943 SYNGAP1Q96PV0 1343 aa22.45■■□□□ 1.18
BCAS4-204ENST00000463943 LARGE1O95461 756 aa22.45■■□□□ 1.18
BCAS4-204ENST00000463943 SNAI1O95863 264 aaPredicted RBP22.45■■□□□ 1.18
BCAS4-204ENST00000463943 HOXA13P31271 388 aaPredicted RBP22.45■■□□□ 1.18
BCAS4-204ENST00000463943 ALDH5A1P51649 535 aaPredicted RBP22.45■■□□□ 1.18
BCAS4-204ENST00000463943 SCRN1Q12765 414 aa22.45■■□□□ 1.18
BCAS4-204ENST00000463943 SYTL5Q8TDW5 730 aaPredicted RBP22.45■■□□□ 1.18
BCAS4-204ENST00000463943 TBC1D32Q96NH3 1257 aa22.45■■□□□ 1.18
BCAS4-204ENST00000463943 SLKQ9H2G2 1235 aaPredicted RBP22.45■■□□□ 1.18
BCAS4-204ENST00000463943 GJB1P08034 283 aa22.44■■□□□ 1.18
BCAS4-204ENST00000463943 HSD17B4P51659 736 aa22.44■■□□□ 1.18
BCAS4-204ENST00000463943 ME3Q16798 604 aa22.44■■□□□ 1.18
BCAS4-204ENST00000463943 WWC2Q6AWC2 1192 aa22.44■■□□□ 1.18
BCAS4-204ENST00000463943 TAAR1Q96RJ0 339 aa22.44■■□□□ 1.18
BCAS4-204ENST00000463943 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.44■■□□□ 1.18
BCAS4-204ENST00000463943 ADD3Q9UEY8 706 aaKnown RBP22.44■■□□□ 1.18
BCAS4-204ENST00000463943 CPLX1O14810 134 aa22.43■■□□□ 1.18
BCAS4-204ENST00000463943 IFNAR1P17181 557 aa22.43■■□□□ 1.18
BCAS4-204ENST00000463943 EN2P19622 333 aaPredicted RBP22.43■■□□□ 1.18
BCAS4-204ENST00000463943 U2AF1L4Q8WU68 220 aaKnown RBP22.43■■□□□ 1.18
BCAS4-204ENST00000463943 SLC26A6Q9BXS9 759 aa22.43■■□□□ 1.18
BCAS4-204ENST00000463943 CNPY2Q9Y2B0 182 aa22.43■■□□□ 1.18
BCAS4-204ENST00000463943 ASB14A6NK59 587 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 DTNBO60941 627 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 GJA8P48165 433 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 GHRHRQ02643 423 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 TYW1BQ6NUM6 668 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 EEPD1Q7L9B9 569 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 DNERQ8NFT8 737 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 MAF1Q9H063 256 aa22.42■■□□□ 1.18
BCAS4-204ENST00000463943 ZHX1Q9UKY1 873 aaPredicted RBP22.42■■□□□ 1.18
BCAS4-204ENST00000463943 GCOM1H8Y6P7 765 aaPredicted RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 PFKFB2O60825 505 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 POLR2MP0CAP2 368 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 ZNF865P0CJ78 1059 aaPredicted RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 PKN1Q16512 942 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 PFKFB3Q16875 520 aaPredicted RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 ANO1Q5XXA6 986 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 RNF26Q9BY78 433 aaPredicted RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 PRPF3O43395 683 aaKnown RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 SGPL1O95470 568 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 NAPAP54920 295 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 AKAP17AQ02040 695 aaKnown RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 ACVR2BQ13705 512 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 RABEP1Q15276 862 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 USP17L6PQ6QN14 398 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 FCHSD1Q86WN1 690 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 NECAB1Q8N987 351 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 SHISA4Q96DD7 197 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 RMDN3Q96TC7 470 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 ABHD16BQ9H3Z7 469 aa22.41■■□□□ 1.18
BCAS4-204ENST00000463943 MAP3K20Q9NYL2 800 aaKnown RBP22.41■■□□□ 1.18
BCAS4-204ENST00000463943 STXBP3O00186 592 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 SEPT4O43236 478 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 SCG2P13521 617 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 MORC4Q8TE76 937 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 KATNBL1Q9H079 304 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 BARHL2Q9NY43 387 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 DDX20Q9UHI6 824 aaKnown RBP22.4■■□□□ 1.18
BCAS4-204ENST00000463943 NRBP1Q9UHY1 535 aa22.4■■□□□ 1.18
BCAS4-204ENST00000463943 LRRC37A2A6NM11 1700 aa22.39■■□□□ 1.18
BCAS4-204ENST00000463943 MEIS2O14770 477 aa22.39■■□□□ 1.17
BCAS4-204ENST00000463943 EIF2AK2P19525 551 aaKnown RBP22.39■■□□□ 1.17
BCAS4-204ENST00000463943 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
BCAS4-204ENST00000463943 IFFO2Q5TF58 517 aa22.39■■□□□ 1.17
BCAS4-204ENST00000463943 ARHGEF16Q5VV41 709 aa22.39■■□□□ 1.17
BCAS4-204ENST00000463943 LHX8Q68G74 356 aa22.39■■□□□ 1.17
BCAS4-204ENST00000463943 CPLX2Q6PUV4 134 aaKnown RBP22.39■■□□□ 1.17
BCAS4-204ENST00000463943 FBXO16Q8IX29 292 aaPredicted RBP22.39■■□□□ 1.17
BCAS4-204ENST00000463943 SAMD3Q8N6K7 520 aa22.39■■□□□ 1.17
BCAS4-204ENST00000463943 NSUN6Q8TEA1 469 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms