RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TMEM87BQ96K49 555 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 TCEANC2Q96MN5 208 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 MTA3Q9BTC8 594 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 MYH6P13533 1939 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 ABCB11O95342 1321 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 ZBTB5O15062 677 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 CTAGE5O15320 804 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 RXRAP19793 462 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 SLC39A5Q6ZMH5 540 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 HOMER1Q86YM7 354 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 NEK1Q96PY6 1258 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0.01
XRN1-203ENST00000463916 PHF24Q9UPV7 400 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 LRRC37A2A6NM11 1700 aa15.08■□□□□ 0.01
XRN1-203ENST00000463916 SMPD1P17405 629 aa15.08■□□□□ 0
XRN1-203ENST00000463916 LIFRP42702 1097 aa15.08■□□□□ 0
XRN1-203ENST00000463916 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
XRN1-203ENST00000463916 TNFAIP2Q03169 654 aa15.08■□□□□ 0
XRN1-203ENST00000463916 SYTL5Q8TDW5 730 aaPredicted RBP15.08■□□□□ 0
XRN1-203ENST00000463916 AMNQ9BXJ7 453 aa15.08■□□□□ 0
XRN1-203ENST00000463916 PRO3102Q9H379 93 aa15.08■□□□□ 0
XRN1-203ENST00000463916 GNEQ9Y223 722 aaKnown RBP15.08■□□□□ 0
XRN1-203ENST00000463916 KCNA10Q16322 511 aa15.07■□□□□ 0
XRN1-203ENST00000463916 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
XRN1-203ENST00000463916 CMTR1Q8N1G2 835 aaKnown RBP15.07■□□□□ 0
XRN1-203ENST00000463916 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
XRN1-203ENST00000463916 TAAR1Q96RJ0 339 aa15.07■□□□□ 0
XRN1-203ENST00000463916 RBM27Q9P2N5 1060 aaKnown RBP15.07■□□□□ 0
XRN1-203ENST00000463916 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
XRN1-203ENST00000463916 PCDHA1Q9Y5I3 950 aa15.07■□□□□ 0
XRN1-203ENST00000463916 A0A1W2PQ45 241 aaPredicted RBP15.07■□□□□ 0
XRN1-203ENST00000463916 A0A1W2PQY0 241 aa15.07■□□□□ 0
XRN1-203ENST00000463916 DDAH1O94760 285 aa15.07■□□□□ 0
XRN1-203ENST00000463916 C6orf222P0C671 652 aaPredicted RBP15.07■□□□□ 0
XRN1-203ENST00000463916 EDNRBP24530 442 aa15.07■□□□□ 0
XRN1-203ENST00000463916 GJA9P57773 515 aa15.07■□□□□ 0
XRN1-203ENST00000463916 HABP4Q5JVS0 413 aaKnown RBP15.07■□□□□ 0
XRN1-203ENST00000463916 TMTC2Q8N394 836 aa15.07■□□□□ 0
XRN1-203ENST00000463916 KCNB2Q92953 911 aa15.07■□□□□ 0
XRN1-203ENST00000463916 MAP3K14Q99558 947 aa15.07■□□□□ 0
XRN1-203ENST00000463916 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
XRN1-203ENST00000463916 TRIOBPQ9H2D6 2365 aa15.07■□□□□ 0
XRN1-203ENST00000463916 CCDC69A6NI79 296 aa15.06■□□□□ 0
XRN1-203ENST00000463916 PLEKHA8P1O95397 391 aa15.06■□□□□ 0
XRN1-203ENST00000463916 CPA1P15085 419 aa15.06■□□□□ 0
XRN1-203ENST00000463916 ACLYP53396 1101 aa15.06■□□□□ 0
XRN1-203ENST00000463916 RTP1P59025 263 aa15.06■□□□□ 0
XRN1-203ENST00000463916 SNX17Q15036 470 aa15.06■□□□□ 0
XRN1-203ENST00000463916 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
XRN1-203ENST00000463916 SRBD1Q8N5C6 995 aaKnown RBP15.06■□□□□ 0
XRN1-203ENST00000463916 DNERQ8NFT8 737 aa15.06■□□□□ 0
XRN1-203ENST00000463916 VTA1Q9NP79 307 aa15.06■□□□□ 0
XRN1-203ENST00000463916 CFBP00751 764 aa15.05■□□□□ 0
XRN1-203ENST00000463916 HSPA4P34932 840 aa15.05■□□□□ 0
XRN1-203ENST00000463916 BEX3Q00994 111 aa15.05■□□□□ 0
XRN1-203ENST00000463916 TRIM60Q495X7 471 aa15.05■□□□□ 0
XRN1-203ENST00000463916 GNASQ5JWF2 1037 aa15.05■□□□□ 0
XRN1-203ENST00000463916 IQSEC1Q6DN90 963 aa15.05■□□□□ 0
XRN1-203ENST00000463916 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ 0
XRN1-203ENST00000463916 SGMS1Q86VZ5 419 aa15.05■□□□□ 0
XRN1-203ENST00000463916 TSEN34Q9BSV6 310 aaKnown RBP15.05■□□□□ 0
XRN1-203ENST00000463916 ATP11BQ9Y2G3 1177 aa15.05■□□□□ 0
XRN1-203ENST00000463916 LOC102724159A0A0B4J2E5 919 aa15.05■□□□□ -0
XRN1-203ENST00000463916 PNMA6FA0A0J9YX94 578 aa15.05■□□□□ -0
XRN1-203ENST00000463916 ASGR1P07306 291 aa15.05■□□□□ -0
XRN1-203ENST00000463916 CST5P28325 142 aaPredicted RBP15.05■□□□□ -0
XRN1-203ENST00000463916 HSD17B4P51659 736 aa15.05■□□□□ -0
XRN1-203ENST00000463916 NKX3-2P78367 333 aa15.05■□□□□ -0
XRN1-203ENST00000463916 PWP2Q15269 919 aaKnown RBP15.05■□□□□ -0
XRN1-203ENST00000463916 MCF2L2Q86YR7 1114 aa15.05■□□□□ -0
XRN1-203ENST00000463916 CTCFLQ8NI51 663 aaPredicted RBP15.05■□□□□ -0
XRN1-203ENST00000463916 BRPF3Q9ULD4 1205 aa15.05■□□□□ -0
XRN1-203ENST00000463916 SNX14Q9Y5W7 946 aa15.05■□□□□ -0
XRN1-203ENST00000463916 SLC12A7Q9Y666 1083 aa15.05■□□□□ -0
XRN1-203ENST00000463916 DYNC1LI2O43237 492 aaPredicted RBP15.04■□□□□ -0
XRN1-203ENST00000463916 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
XRN1-203ENST00000463916 KIF5BP33176 963 aa15.04■□□□□ -0
XRN1-203ENST00000463916 PDE4DQ08499 809 aa15.04■□□□□ -0
XRN1-203ENST00000463916 TLK2Q86UE8 772 aa15.04■□□□□ -0
XRN1-203ENST00000463916 RMDN3Q96TC7 470 aa15.04■□□□□ -0
XRN1-203ENST00000463916 GDF15Q99988 308 aa15.04■□□□□ -0
XRN1-203ENST00000463916 SPZ1Q9BXG8 430 aa15.04■□□□□ -0
XRN1-203ENST00000463916 WDR11Q9BZH6 1224 aa15.04■□□□□ -0
XRN1-203ENST00000463916 RBM47A0AV96 593 aaKnown RBP15.04■□□□□ -0
XRN1-203ENST00000463916 GHRHRQ02643 423 aa15.04■□□□□ -0
XRN1-203ENST00000463916 C1orf53Q5VUE5 145 aa15.04■□□□□ -0
XRN1-203ENST00000463916 MICU3Q86XE3 530 aa15.04■□□□□ -0
XRN1-203ENST00000463916 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
XRN1-203ENST00000463916 FANCBQ8NB91 859 aa15.04■□□□□ -0
XRN1-203ENST00000463916 MAF1Q9H063 256 aa15.04■□□□□ -0
XRN1-203ENST00000463916 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
XRN1-203ENST00000463916 MOXD2PA6NHM9 499 aa15.03■□□□□ -0
XRN1-203ENST00000463916 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
XRN1-203ENST00000463916 TLE2Q04725 743 aa15.03■□□□□ -0
XRN1-203ENST00000463916 KRT32Q14532 448 aa15.03■□□□□ -0
XRN1-203ENST00000463916 DUSP28Q4G0W2 176 aa15.03■□□□□ -0
XRN1-203ENST00000463916 APOA5Q6Q788 366 aa15.03■□□□□ -0
XRN1-203ENST00000463916 NSUN6Q8TEA1 469 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms