RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-204ENST00000463685 TLR2O60603 784 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 TBC1D8O95759 1140 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 POLR2MP0CAP2 368 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.34
ABCF3-204ENST00000463685 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 REM2Q8IYK8 340 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-204ENST00000463685 RGS22Q8NE09 1264 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 PURBQ96QR8 312 aaKnown RBP17.17■□□□□ 0.34
ABCF3-204ENST00000463685 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-204ENST00000463685 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
ABCF3-204ENST00000463685 TRPA1O75762 1119 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 SLC25A27O95847 323 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 CLK2P49760 499 aaKnown RBP17.16■□□□□ 0.34
ABCF3-204ENST00000463685 BAATQ14032 418 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-204ENST00000463685 FAM110CQ1W6H9 321 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 MCF2L2Q86YR7 1114 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 A1CFQ9NQ94 594 aaKnown RBP17.16■□□□□ 0.34
ABCF3-204ENST00000463685 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 THSD7BQ9C0I4 1608 aa17.16■□□□□ 0.34
ABCF3-204ENST00000463685 ALDH1A1P00352 501 aa17.15■□□□□ 0.34
ABCF3-204ENST00000463685 HSD17B4P51659 736 aa17.15■□□□□ 0.34
ABCF3-204ENST00000463685 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
ABCF3-204ENST00000463685 CCNA1P78396 465 aa17.15■□□□□ 0.34
ABCF3-204ENST00000463685 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
ABCF3-204ENST00000463685 SYTL5Q8TDW5 730 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-204ENST00000463685 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
ABCF3-204ENST00000463685 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
ABCF3-204ENST00000463685 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
ABCF3-204ENST00000463685 ANKRD35Q8N283 1001 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
ABCF3-204ENST00000463685 MMP19Q99542 508 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-204ENST00000463685 MROH8Q9H579 483 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
ABCF3-204ENST00000463685 RBBP6Q7Z6E9 1792 aaKnown RBP17.14■□□□□ 0.33
ABCF3-204ENST00000463685 WNT7AO00755 349 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 PGK2P07205 417 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 COPB2P35606 906 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 UBXN2AP68543 259 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 GHRHRQ02643 423 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 NBR1Q14596 966 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 INF2Q27J81 1249 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 TAAR1Q96RJ0 339 aa17.13■□□□□ 0.33
ABCF3-204ENST00000463685 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCF3-204ENST00000463685 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
ABCF3-204ENST00000463685 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-204ENST00000463685 CNTN2Q02246 1040 aa17.12■□□□□ 0.33
ABCF3-204ENST00000463685 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
ABCF3-204ENST00000463685 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
ABCF3-204ENST00000463685 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
ABCF3-204ENST00000463685 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
ABCF3-204ENST00000463685 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
ABCF3-204ENST00000463685 PCNTO95613 3336 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 EDIL3O43854 480 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 FCER1AP12319 257 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 CTGFP29279 349 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
ABCF3-204ENST00000463685 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
ABCF3-204ENST00000463685 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-204ENST00000463685 LCTP09848 1927 aa17.11■□□□□ 0.33
ABCF3-204ENST00000463685 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-204ENST00000463685 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
ABCF3-204ENST00000463685 MAPK4P31152 587 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 KCTD2Q14681 263 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.1■□□□□ 0.33
ABCF3-204ENST00000463685 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 ARHGAP39Q9C0H5 1083 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 PFASO15067 1338 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 ZSWIM8A7E2V4 1837 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
ABCF3-204ENST00000463685 SOWAHBA6NEL2 793 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 PTPREP23469 700 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 ADORA2AP29274 412 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 CAP1Q01518 475 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
ABCF3-204ENST00000463685 PXMP2Q9NR77 195 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms