RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PRPHP41219 470 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 DTHD1Q6ZMT9 781 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 RBM43Q6ZSC3 357 aaKnown RBP21.58■■□□□ 1.05
CCDC78-206ENST00000463539 CKAP2LQ8IYA6 745 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 CPXCR1Q8N123 301 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 ATG4CQ96DT6 458 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 NAP1L4Q99733 375 aaKnown RBP21.58■■□□□ 1.05
CCDC78-206ENST00000463539 SDF4Q9BRK5 362 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 GCOM1H8Y6P7 765 aaPredicted RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 TDP2O95551 362 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 CFBP00751 764 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 POLR2MP0CAP2 368 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 COG2Q14746 738 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 PPP4R3AQ6IN85 833 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 CATSPERGQ6ZRH7 1159 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 TSPY26PQ9H489 355 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 ZNF408Q9H9D4 720 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 RAVER2Q9HCJ3 691 aaKnown RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 IRF6O14896 467 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 GCFC2P16383 781 aaKnown RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 LONP1P36776 959 aaKnown RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 IL17AQ16552 155 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 SYMPKQ92797 1274 aaKnown RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
CCDC78-206ENST00000463539 P2RX7Q99572 595 aaKnown RBP21.57■■□□□ 1.04
CCDC78-206ENST00000463539 EDIL3O43854 480 aa21.56■■□□□ 1.04
CCDC78-206ENST00000463539 DSG3P32926 999 aa21.56■■□□□ 1.04
CCDC78-206ENST00000463539 USP11P51784 963 aa21.56■■□□□ 1.04
CCDC78-206ENST00000463539 USP49Q70CQ1 688 aa21.56■■□□□ 1.04
CCDC78-206ENST00000463539 PPIL2Q13356 520 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 LDLRAD1Q5T700 205 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 EPSTI1Q96J88 318 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 DDX25Q9UHL0 483 aaKnown RBP21.55■■□□□ 1.04
CCDC78-206ENST00000463539 MYPNQ86TC9 1320 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 A0A0G2JLL6 359 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-206ENST00000463539 CXCL11O14625 94 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 SLC37A4O43826 429 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 ALAS1P13196 640 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 SREBF1P36956 1147 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 ARHGAP4P98171 946 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 CALCRLQ16602 461 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 PRRT2Q7Z6L0 340 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-206ENST00000463539 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 OPTNQ96CV9 577 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 WNK4Q96J92 1243 aa21.55■■□□□ 1.04
CCDC78-206ENST00000463539 POLR2DO15514 142 aaKnown RBP21.54■■□□□ 1.04
CCDC78-206ENST00000463539 CCDC192P0DO97 292 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 OAZ1P54368 228 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 MCF2L2Q86YR7 1114 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 PROCA1Q8NCQ7 364 aaPredicted RBP21.54■■□□□ 1.04
CCDC78-206ENST00000463539 CRYGNQ8WXF5 182 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 TBC1D5Q92609 795 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 FUCA2Q9BTY2 467 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 HOMER2Q9NSB8 354 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 HOXC10Q9NYD6 342 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 ADAMTS5Q9UNA0 930 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 KCNH4Q9UQ05 1017 aa21.54■■□□□ 1.04
CCDC78-206ENST00000463539 DEKP35659 375 aaKnown RBP21.53■■□□□ 1.04
CCDC78-206ENST00000463539 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC78-206ENST00000463539 L1TD1Q5T7N2 865 aaKnown RBP21.53■■□□□ 1.04
CCDC78-206ENST00000463539 GADL1Q6ZQY3 521 aa21.53■■□□□ 1.04
CCDC78-206ENST00000463539 CNNM3Q8NE01 707 aa21.53■■□□□ 1.04
CCDC78-206ENST00000463539 MTMR9Q96QG7 549 aa21.53■■□□□ 1.04
CCDC78-206ENST00000463539 NMRK2Q9NPI5 230 aa21.53■■□□□ 1.04
CCDC78-206ENST00000463539 UNCXA6NJT0 531 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 NFIBO00712 420 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 TXLNAP40222 546 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 MRE11P49959 708 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 LONRF3Q496Y0 759 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 MOXD1Q6UVY6 613 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 KRBA2Q6ZNG9 492 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 PDILTQ8N807 584 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 REPS2Q8NFH8 660 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 ZNF526Q8TF50 670 aaPredicted RBP21.52■■□□□ 1.04
CCDC78-206ENST00000463539 CLEC4DQ8WXI8 215 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 PANK2Q9BZ23 570 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 EHMT1Q9H9B1 1298 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 GRPEL1Q9HAV7 217 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 CYP3A7-CYP3A51PA0A087WV96 503 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 SPDYE16A6NNV3 312 aaPredicted RBP21.52■■□□□ 1.04
CCDC78-206ENST00000463539 CYP3A7P24462 503 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 HSD17B4P51659 736 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 FKBP1BP68106 108 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 SASS6Q6UVJ0 657 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 AK8Q96MA6 479 aa21.52■■□□□ 1.04
CCDC78-206ENST00000463539 TYRO3Q06418 890 aa21.51■■□□□ 1.03
CCDC78-206ENST00000463539 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
CCDC78-206ENST00000463539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.5■■□□□ 1.03
CCDC78-206ENST00000463539 TXKP42681 527 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 GHRHRQ02643 423 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 TMEM266Q2M3C6 531 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 MUM1L1Q5H9M0 696 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 SNRNP48Q6IEG0 339 aaKnown RBP21.5■■□□□ 1.03
CCDC78-206ENST00000463539 SLC10A4Q96EP9 437 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 MBOAT7Q96N66 472 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 PYM1Q9BRP8 204 aaKnown RBP21.5■■□□□ 1.03
CCDC78-206ENST00000463539 HOOK1Q9UJC3 728 aaKnown RBP21.5■■□□□ 1.03
CCDC78-206ENST00000463539 ZNF214Q9UL59 606 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms