RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
SSR3-202ENST00000463503 DEFB128Q7Z7B8 93 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 GDPD5Q8WTR4 605 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 TECTAO75443 2155 aa13.22□□□□□ -0.29
SSR3-202ENST00000463503 TNKSO95271 1327 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 LCHNA4D1U4 455 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 SOWAHBA6NEL2 793 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 F5H6K3 240 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 GOLIM4O00461 696 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 CHGBP05060 677 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.29
SSR3-202ENST00000463503 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 OAZ1P54368 228 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 KLRC3Q07444 240 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
SSR3-202ENST00000463503 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.29
SSR3-202ENST00000463503 A1CFQ9NQ94 594 aaKnown RBP13.21□□□□□ -0.29
SSR3-202ENST00000463503 PDGFCQ9NRA1 345 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 FBXO40Q9UH90 709 aa13.21□□□□□ -0.29
SSR3-202ENST00000463503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.2□□□□□ -0.3
SSR3-202ENST00000463503 ADD2P35612 726 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
SSR3-202ENST00000463503 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
SSR3-202ENST00000463503 GJD3Q8N144 294 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSR3-202ENST00000463503 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
SSR3-202ENST00000463503 CACNA1AO00555 2505 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 ZNF536O15090 1300 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 MYO7AQ13402 2215 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 HIP1O00291 1037 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
SSR3-202ENST00000463503 ZBED4O75132 1171 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 ACTN1P12814 892 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 IL9P15248 144 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 SDSP20132 328 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 RASA1P20936 1047 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 RFC2P35250 354 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 LEXMQ3ZCV2 418 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
SSR3-202ENST00000463503 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 Q9Y3F1 56 aa13.19□□□□□ -0.3
SSR3-202ENST00000463503 ZEB2O60315 1214 aa13.18□□□□□ -0.3
SSR3-202ENST00000463503 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
SSR3-202ENST00000463503 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
SSR3-202ENST00000463503 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
SSR3-202ENST00000463503 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 ASB14A6NK59 587 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
SSR3-202ENST00000463503 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 SUPT20HL2P0C7V6 817 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
SSR3-202ENST00000463503 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 KCNH6Q9H252 994 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
SSR3-202ENST00000463503 CACNA1HO95180 2353 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
SSR3-202ENST00000463503 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 ALADP13716 330 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 KCNA5P22460 613 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 WDR5P61964 334 aaKnown RBP13.16□□□□□ -0.3
SSR3-202ENST00000463503 GPNMBQ14956 572 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 EEPD1Q7L9B9 569 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
SSR3-202ENST00000463503 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 PPP1R13LQ8WUF5 828 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 APPBP2Q92624 585 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 FEM1BQ9UK73 627 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
SSR3-202ENST00000463503 MYH6P13533 1939 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 KIF28PB7ZC32 967 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 RBAK-RBAKDNI3L0D1 243 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 DEFB103AP81534 67 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 DUSP28Q4G0W2 176 aa13.15□□□□□ -0.3
SSR3-202ENST00000463503 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms