RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SMPD1P17405 629 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 FAAP100Q0VG06 881 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 TRDNQ13061 729 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 CDC37Q16543 378 aaPredicted RBP25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 FSCN1Q16658 493 aaKnown RBP25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 IFIT1BQ5T764 474 aaKnown RBP25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 TAPT1Q6NXT6 567 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 KIAA1211Q6ZU35 1233 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 UBA5Q9GZZ9 404 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 PDGFCQ9NRA1 345 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 Q9Y3F1 56 aa25.92■■□□□ 1.74
PDLIM7-206ENST00000463411 ARVCFO00192 962 aa25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 CTAGE5O15320 804 aa25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 TLR3O15455 904 aaKnown RBP25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 RPS6P62753 249 aaKnown RBP25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 FPGSQ05932 587 aa25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 SHHQ15465 462 aa25.91■■□□□ 1.74
PDLIM7-206ENST00000463411 B4DLN1 442 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 DYNC1LI2O43237 492 aaPredicted RBP25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 CHMLP26374 656 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 MRPL12P52815 198 aaKnown RBP25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 PDE4DQ08499 809 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 Q7L0L9 218 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 DNERQ8NFT8 737 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 CPVLQ9H3G5 476 aa25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 U3KPZ7 1027 aaPredicted RBP25.9■■□□□ 1.74
PDLIM7-206ENST00000463411 ABCB11O95342 1321 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 ITGB8P26012 769 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 CDK7P50613 346 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 C9orf50Q5SZB4 431 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 CXCL17Q6UXB2 119 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 ADGRF4Q8IZF3 695 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 MAF1Q9H063 256 aa25.89■■□□□ 1.74
PDLIM7-206ENST00000463411 DUSP28Q4G0W2 176 aa25.88■■□□□ 1.73
PDLIM7-206ENST00000463411 RGS22Q8NE09 1264 aa25.88■■□□□ 1.73
PDLIM7-206ENST00000463411 WDR11Q9BZH6 1224 aa25.88■■□□□ 1.73
PDLIM7-206ENST00000463411 TBX21Q9UL17 535 aa25.88■■□□□ 1.73
PDLIM7-206ENST00000463411 TIMP1P01033 207 aa25.87■■□□□ 1.73
PDLIM7-206ENST00000463411 RALYLQ86SE5 291 aaKnown RBP25.87■■□□□ 1.73
PDLIM7-206ENST00000463411 SEZ6LQ9BYH1 1024 aa25.87■■□□□ 1.73
PDLIM7-206ENST00000463411 ERICH2A1L162 156 aa25.86■■□□□ 1.73
PDLIM7-206ENST00000463411 MCF2L2Q86YR7 1114 aa25.86■■□□□ 1.73
PDLIM7-206ENST00000463411 FAM126BQ8IXS8 530 aa25.86■■□□□ 1.73
PDLIM7-206ENST00000463411 RNPC3Q96LT9 517 aaKnown RBP25.86■■□□□ 1.73
PDLIM7-206ENST00000463411 CPT1AP50416 773 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 PTH1RQ03431 593 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 PPP2R5BQ15173 497 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 QRICH1Q2TAL8 776 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 FAM109BQ6ICB4 259 aaPredicted RBP25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 CYB5R4Q7L1T6 521 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 FBXO11Q86XK2 927 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 VAT1LQ9HCJ6 419 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 MTMR10Q9NXD2 777 aa25.85■■□□□ 1.73
PDLIM7-206ENST00000463411 RBM47A0AV96 593 aaKnown RBP25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 NKRFO15226 690 aaKnown RBP eCLIP25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 SGSM2O43147 1006 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 CYP21A2P08686 494 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 PTGS1P23219 599 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 EDNRBP24530 442 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 ITGA7Q13683 1181 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 SART3Q15020 963 aaKnown RBP25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 SEC23AQ15436 765 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 BRDTQ58F21 947 aaPredicted RBP25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 ZNF697Q5TEC3 545 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 OR6J1Q8NGC5 347 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 SCFD2Q8WU76 684 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 POLR3EQ9NVU0 708 aa25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 MRPL11Q9Y3B7 192 aaKnown RBP25.84■■□□□ 1.73
PDLIM7-206ENST00000463411 PPIGQ13427 754 aaKnown RBP eCLIP25.83■■□□□ 1.731e-7■■■□□ 16.8
PDLIM7-206ENST00000463411 TMEM63BQ5T3F8 832 aa25.83■■□□□ 1.73
PDLIM7-206ENST00000463411 MFSD5Q6N075 450 aa25.83■■□□□ 1.73
PDLIM7-206ENST00000463411 TMEM199Q8N511 208 aa25.83■■□□□ 1.73
PDLIM7-206ENST00000463411 NCOA7Q8NI08 942 aa25.83■■□□□ 1.73
PDLIM7-206ENST00000463411 JMJD4Q9H9V9 463 aa25.83■■□□□ 1.73
PDLIM7-206ENST00000463411 KLRF2D3W0D1 207 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 IFIT3O14879 490 aaKnown RBP25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 EPHB4P54760 987 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 SMAD3P84022 425 aaKnown RBP25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 SLC43A3Q8NBI5 491 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 AMNQ9BXJ7 453 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 PPP1R12CQ9BZL4 782 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 GPHNQ9NQX3 736 aaPredicted RBP25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 STXBP5LQ9Y2K9 1186 aa25.82■■□□□ 1.72
PDLIM7-206ENST00000463411 CD4P01730 458 aa25.81■■□□□ 1.72
PDLIM7-206ENST00000463411 STAG2Q8N3U4 1231 aa25.81■■□□□ 1.72
PDLIM7-206ENST00000463411 NSUN6Q8TEA1 469 aaKnown RBP25.81■■□□□ 1.72
PDLIM7-206ENST00000463411 E7EWF7 191 aa25.8■■□□□ 1.72
PDLIM7-206ENST00000463411 TTLL4Q14679 1199 aa25.8■■□□□ 1.72
PDLIM7-206ENST00000463411 WTAPQ15007 396 aa25.8■■□□□ 1.72
PDLIM7-206ENST00000463411 SYTL5Q8TDW5 730 aaPredicted RBP25.8■■□□□ 1.72
PDLIM7-206ENST00000463411 MAD2L2Q9UI95 211 aa25.8■■□□□ 1.72
PDLIM7-206ENST00000463411 MYL3P08590 195 aa25.79■■□□□ 1.72
PDLIM7-206ENST00000463411 TXNP10599 105 aaKnown RBP25.79■■□□□ 1.72
PDLIM7-206ENST00000463411 PSMC6P62333 389 aa25.79■■□□□ 1.72
PDLIM7-206ENST00000463411 TRAF1Q13077 416 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 FAM161BQ96MY7 647 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 TAAR1Q96RJ0 339 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 IWS1Q96ST2 819 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 RMDN3Q96TC7 470 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 HIPK3Q9H422 1215 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms