RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-211ENST00000463372 Q9Y3F1 56 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 IL16Q14005 1332 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 NDUFV1P49821 464 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
C9orf3-211ENST00000463372 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
C9orf3-211ENST00000463372 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 FGD4Q96M96 766 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 HINFPQ9BQA5 517 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 TMX2Q9Y320 296 aa16.28■□□□□ 0.2
C9orf3-211ENST00000463372 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
C9orf3-211ENST00000463372 EYA4O95677 639 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 LMNAP02545 664 aaKnown RBP16.27■□□□□ 0.2
C9orf3-211ENST00000463372 PTGS1P23219 599 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-211ENST00000463372 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 TMEM192Q8IY95 271 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 CAGE1Q8TC20 777 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
C9orf3-211ENST00000463372 MYL3P08590 195 aa16.26■□□□□ 0.19
C9orf3-211ENST00000463372 PURAQ00577 322 aaKnown RBP16.26■□□□□ 0.19
C9orf3-211ENST00000463372 IQSEC1Q6DN90 963 aa16.26■□□□□ 0.19
C9orf3-211ENST00000463372 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
C9orf3-211ENST00000463372 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
C9orf3-211ENST00000463372 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-211ENST00000463372 MTG1Q9BT17 334 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-211ENST00000463372 PHF7Q9BWX1 381 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-211ENST00000463372 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
C9orf3-211ENST00000463372 OTOGLQ3ZCN5 2332 aa16.26■□□□□ 0.19
C9orf3-211ENST00000463372 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-211ENST00000463372 SELPP16109 830 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 PLCD1P51178 756 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 HTRA4P83105 476 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-211ENST00000463372 ICA1Q05084 483 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 RSPO4Q2I0M5 234 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-211ENST00000463372 CERS3Q8IU89 383 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 SEMA4AQ9H3S1 761 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
C9orf3-211ENST00000463372 ASB14A6NK59 587 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 LINC01565O15544 149 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 RAD21O60216 631 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 AMHP03971 560 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
C9orf3-211ENST00000463372 PTPN11Q06124 597 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-211ENST00000463372 ADAM15Q13444 863 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 GPNMBQ14956 572 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 ASTLQ6HA08 431 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-211ENST00000463372 LRRC8DQ7L1W4 858 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 SMRP1Q8NCR6 262 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 LMAN2LQ9H0V9 348 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-211ENST00000463372 FBXO40Q9UH90 709 aa16.24■□□□□ 0.19
C9orf3-211ENST00000463372 CTDP1Q9Y5B0 961 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-211ENST00000463372 CXCL10P02778 98 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 UQCRFS1P1P0C7P4 283 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■■■■□ 26.4
C9orf3-211ENST00000463372 CPT1AP50416 773 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 TFCP2Q12800 502 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 KIAA0319Q5VV43 1072 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 MYOCDQ8IZQ8 938 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 CPXCR1Q8N123 301 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 YME1L1Q96TA2 773 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
C9orf3-211ENST00000463372 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 PTGISQ16647 500 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 TCTN1Q2MV58 587 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
C9orf3-211ENST00000463372 SIAH1Q8IUQ4 282 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 SLF1Q9BQI6 1058 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 MFSD1Q9H3U5 465 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 GOPCQ9HD26 462 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
C9orf3-211ENST00000463372 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-211ENST00000463372 NBNO60934 754 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 SDHBP21912 280 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 CYP7A1P22680 504 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 GABPAQ06546 454 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 COASYQ13057 564 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-211ENST00000463372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
C9orf3-211ENST00000463372 EEPD1Q7L9B9 569 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 CHST13Q8NET6 341 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 HAUS7Q99871 368 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
C9orf3-211ENST00000463372 USP17L12C9JPN9 530 aa16.2■□□□□ 0.18
C9orf3-211ENST00000463372 USP17L21D6R901 530 aa16.2■□□□□ 0.18
C9orf3-211ENST00000463372 HOXB3P14651 431 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-211ENST00000463372 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms