RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ASTN2O75129 1339 aaPredicted RBP14.46□□□□□ -0.09
VAPB-203ENST00000463370 MEIS2O14770 477 aa14.46□□□□□ -0.09
VAPB-203ENST00000463370 ERCC5P28715 1186 aaPredicted RBP14.46□□□□□ -0.09
VAPB-203ENST00000463370 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
VAPB-203ENST00000463370 ARMCX5Q6P1M9 558 aa14.46□□□□□ -0.09
VAPB-203ENST00000463370 AK8Q96MA6 479 aa14.46□□□□□ -0.09
VAPB-203ENST00000463370 MAPK8IP1Q9UQF2 711 aa14.46□□□□□ -0.09
VAPB-203ENST00000463370 GDAQ9Y2T3 454 aa14.46□□□□□ -0.09
VAPB-203ENST00000463370 POTEMA6NI47 508 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 CCZ1BP86790 482 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 CCZ1P86791 482 aaPredicted RBP14.46□□□□□ -0.1
VAPB-203ENST00000463370 FKBP1CQ5VVH2 108 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 HAS1Q92839 578 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 NUDT12Q9BQG2 462 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 KBTBD4Q9NVX7 518 aa14.46□□□□□ -0.1
VAPB-203ENST00000463370 OPLAHO14841 1288 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.45□□□□□ -0.1
VAPB-203ENST00000463370 FAM83AQ86UY5 434 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
VAPB-203ENST00000463370 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 CTNND2Q9UQB3 1225 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 R3HCC1Q9Y3T6 440 aaKnown RBP14.45□□□□□ -0.1
VAPB-203ENST00000463370 SYNRGQ9UMZ2 1314 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 PSDA5PKW4 1024 aaPredicted RBP14.45□□□□□ -0.1
VAPB-203ENST00000463370 KLRC4O43908 158 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 ORC2Q13416 577 aaPredicted RBP14.45□□□□□ -0.1
VAPB-203ENST00000463370 RASA3Q14644 834 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 PPP4R3AQ6IN85 833 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 BTNL9Q6UXG8 535 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 CCDC125Q86Z20 511 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 AMNQ9BXJ7 453 aa14.45□□□□□ -0.1
VAPB-203ENST00000463370 MYO1BO43795 1136 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
VAPB-203ENST00000463370 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 GRB10Q13322 594 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 APTXQ7Z2E3 356 aaKnown RBP14.44□□□□□ -0.1
VAPB-203ENST00000463370 SAMD7Q7Z3H4 446 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 FBXO11Q86XK2 927 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 LRWD1Q9UFC0 647 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 TBC1D12O60347 775 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 SKILP12757 684 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
VAPB-203ENST00000463370 CAP2P40123 477 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 DHX8Q14562 1220 aaKnown RBP14.44□□□□□ -0.1
VAPB-203ENST00000463370 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 SPATA1Q5VX52 437 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 NLGN2Q8NFZ4 835 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 PNMA5Q96PV4 448 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 ANO3Q9BYT9 981 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 ARHGEF10LQ9HCE6 1279 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
VAPB-203ENST00000463370 HOXA13P31271 388 aaPredicted RBP14.43□□□□□ -0.1
VAPB-203ENST00000463370 PRCPP42785 496 aa14.43□□□□□ -0.1
VAPB-203ENST00000463370 PTGER2P43116 358 aa14.43□□□□□ -0.1
VAPB-203ENST00000463370 ZNF280AP59817 542 aaPredicted RBP14.43□□□□□ -0.1
VAPB-203ENST00000463370 ECM1Q16610 540 aa14.43□□□□□ -0.1
VAPB-203ENST00000463370 ZNF658Q5TYW1 1059 aaPredicted RBP14.43□□□□□ -0.1
VAPB-203ENST00000463370 VSTM4Q8IW00 320 aa14.43□□□□□ -0.1
VAPB-203ENST00000463370 TEPSINQ96N21 525 aa14.43□□□□□ -0.1
VAPB-203ENST00000463370 USP27XA6NNY8 438 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 GMPSP49915 693 aaPredicted RBP14.42□□□□□ -0.1
VAPB-203ENST00000463370 STAT2P52630 851 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 CRYGNQ8WXF5 182 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 BLOC1S4Q9NUP1 217 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 CBFA2T2O43439 604 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 MAP3K10Q02779 954 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 TBC1D10BQ4KMP7 808 aaPredicted RBP14.42□□□□□ -0.1
VAPB-203ENST00000463370 CDKAL1Q5VV42 579 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 KCNK18Q7Z418 384 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 TRIM9Q9C026 710 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 FBXO28Q9NVF7 368 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
VAPB-203ENST00000463370 PMS1P54277 932 aaKnown RBP14.41□□□□□ -0.1
VAPB-203ENST00000463370 GSDMDP57764 484 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 DGKZQ13574 1117 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 TNIP1Q15025 636 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 CT47A1Q5JQC4 288 aaPredicted RBP14.41□□□□□ -0.1
VAPB-203ENST00000463370 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
VAPB-203ENST00000463370 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
VAPB-203ENST00000463370 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 TBC1D5Q92609 795 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 KIFC2Q96AC6 838 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 VCPKMTQ9H867 229 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 RMND1Q9NWS8 449 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 BRCA1P38398 1863 aaKnown RBP14.41□□□□□ -0.1
VAPB-203ENST00000463370 ARFGEF1Q9Y6D6 1849 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 TRIM49BA6NDI0 452 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 TEX33O43247 280 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 CCDC174Q6PII3 467 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 HPS3Q969F9 1004 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 CD2APQ9Y5K6 639 aa14.41□□□□□ -0.1
VAPB-203ENST00000463370 RHOBTB3O94955 611 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms