RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MCTP2Q6DN12 878 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 FAM173BQ6P4H8 233 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 MCF2L2Q86YR7 1114 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
COL6A1-202ENST00000463060 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
COL6A1-202ENST00000463060 TNPO1Q92973 898 aaKnown RBP16.44■□□□□ 0.22
COL6A1-202ENST00000463060 CFHR5Q9BXR6 569 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
COL6A1-202ENST00000463060 THSD7BQ9C0I4 1608 aa16.44■□□□□ 0.22
COL6A1-202ENST00000463060 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
COL6A1-202ENST00000463060 ALDH1A1P00352 501 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 COPB2P35606 906 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
COL6A1-202ENST00000463060 FAM110CQ1W6H9 321 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 CRYGNQ8WXF5 182 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 FBXO40Q9UH90 709 aa16.43■□□□□ 0.22
COL6A1-202ENST00000463060 CFBP00751 764 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 FOSP01100 380 aaPredicted RBP16.42■□□□□ 0.22
COL6A1-202ENST00000463060 ERCC3P19447 782 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 HOXA13P31271 388 aaPredicted RBP16.42■□□□□ 0.22
COL6A1-202ENST00000463060 CRHR2Q13324 411 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 KRT25Q7Z3Z0 450 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 SYTL5Q8TDW5 730 aaPredicted RBP16.42■□□□□ 0.22
COL6A1-202ENST00000463060 PORCNQ9H237 461 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 MROH8Q9H579 483 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
COL6A1-202ENST00000463060 CYP39A1Q9NYL5 469 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 COL20A1Q9P218 1284 aa16.42■□□□□ 0.22
COL6A1-202ENST00000463060 RPS6P62753 249 aaKnown RBP16.41■□□□□ 0.22
COL6A1-202ENST00000463060 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
COL6A1-202ENST00000463060 CHAMP1Q96JM3 812 aa16.41■□□□□ 0.22
COL6A1-202ENST00000463060 CPA4Q9UI42 421 aa16.41■□□□□ 0.22
COL6A1-202ENST00000463060 WNT7AO00755 349 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 CCNA1P78396 465 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 BAATQ14032 418 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-202ENST00000463060 NONOQ15233 471 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL6A1-202ENST00000463060 SLC30A10Q6XR72 485 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 PIK3AP1Q6ZUJ8 805 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 NCAPG2Q86XI2 1143 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
COL6A1-202ENST00000463060 RBBP6Q7Z6E9 1792 aaKnown RBP16.39■□□□□ 0.21
COL6A1-202ENST00000463060 DNAJC25-GNG10A0A024R161 153 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 CCDC194A0A1B0GVG4 234 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 SREBF1P36956 1147 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
COL6A1-202ENST00000463060 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
COL6A1-202ENST00000463060 RILPL1Q5EBL4 403 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 NSMFQ6X4W1 530 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 ANO3Q9BYT9 981 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.21
COL6A1-202ENST00000463060 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
COL6A1-202ENST00000463060 INF2Q27J81 1249 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 FCHSD1Q86WN1 690 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 FAM133AQ8N9E0 248 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 TAAR1Q96RJ0 339 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
COL6A1-202ENST00000463060 PFASO15067 1338 aa16.38■□□□□ 0.21
COL6A1-202ENST00000463060 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 LCTP09848 1927 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 TCHHQ07283 1943 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 SPDYE3A6NKU9 549 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 STRNO43815 780 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 CYP3A4P08684 503 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 MAPK4P31152 587 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 USP11P51784 963 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-202ENST00000463060 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
COL6A1-202ENST00000463060 NEK8Q86SG6 692 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 MBOAT7Q96N66 472 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 PURBQ96QR8 312 aaKnown RBP16.37■□□□□ 0.21
COL6A1-202ENST00000463060 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.37■□□□□ 0.21
COL6A1-202ENST00000463060 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 PCDHB6Q9Y5E3 794 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 ASTN1O14525 1302 aa16.37■□□□□ 0.21
COL6A1-202ENST00000463060 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
COL6A1-202ENST00000463060 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 FCER1AP12319 257 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 PTPREP23469 700 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 CYP3A7P24462 503 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms