RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 BRWD3Q6RI45 1802 aa13.88□□□□□ -0.19
HDAC4-208ENST00000463007 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
HDAC4-208ENST00000463007 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
HDAC4-208ENST00000463007 PPP4CP60510 307 aa13.88□□□□□ -0.19
HDAC4-208ENST00000463007 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
HDAC4-208ENST00000463007 ARID5AQ03989 594 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 SLC35G1Q2M3R5 365 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 SH2D3CQ8N5H7 860 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-208ENST00000463007 BCAS4Q8TDM0 211 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 DMGDHQ9UI17 866 aaKnown RBP13.87□□□□□ -0.19
HDAC4-208ENST00000463007 ZNF646O15015 1829 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-208ENST00000463007 BUB1O43683 1085 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 KRT86O43790 486 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 UBA7P41226 1012 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 AMPD2Q01433 879 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 COG1Q8WTW3 980 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 PSD3Q9NYI0 1048 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 M0R2N6 131 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 MOCS3O95396 460 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 ADRA2BP18089 450 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 INF2Q27J81 1249 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 IFT81Q8WYA0 676 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-208ENST00000463007 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-208ENST00000463007 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
HDAC4-208ENST00000463007 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-208ENST00000463007 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 FBXW10Q5XX13 1052 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 NFRKBQ6P4R8 1299 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 IRF2BP1Q8IU81 584 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 MB21D1Q8N884 522 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 FERMT2Q96AC1 680 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 MYH1P12882 1939 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 USP17L8P0C7I0 530 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-208ENST00000463007 MAP9Q49MG5 647 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 RUFY1Q96T51 708 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-208ENST00000463007 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 TCP11L1Q9NUJ3 509 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 RWDD2AQ9UIY3 292 aa13.86□□□□□ -0.19
HDAC4-208ENST00000463007 TSPY2A6NKD2 308 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 MAGEA9P43362 315 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 GNGT1P63211 74 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 FAM196AQ6ZSG2 479 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 TRAPPC11Q7Z392 1133 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 FCER1AP12319 257 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 DGKHQ86XP1 1220 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 WDR66Q8TBY9 1149 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 HAUS4Q9H6D7 363 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 LIMA1Q9UHB6 759 aaKnown RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 GREB1LQ9C091 1923 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 KLRG2A4D1S0 409 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 ZSCAN5CA6NGD5 496 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 AKR1B10O60218 316 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 IL1R1P14778 569 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 NOVP48745 357 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 GUCY2FP51841 1108 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 PDCLQ13371 301 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 SPA17Q15506 151 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 HEATR3Q7Z4Q2 680 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 CCDC51Q96ER9 411 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 NOC4LQ9BVI4 516 aaKnown RBP13.85□□□□□ -0.19
HDAC4-208ENST00000463007 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 CAPN6Q9Y6Q1 641 aa13.85□□□□□ -0.19
HDAC4-208ENST00000463007 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 H0YHG0 523 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-208ENST00000463007 SCG2P13521 617 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 GYS1P13807 737 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 ASIC1P78348 528 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 IRX3P78415 501 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-208ENST00000463007 SPAG1Q07617 926 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 PDXDC2PQ6P474 469 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 C4orf32Q8N8J7 132 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms