RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MCF2L2	Q86YR7	1114 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	SRBD1	Q8N5C6	995 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	TBC1D5	Q92609	795 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	FGD4	Q96M96	766 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	MAP3K14	Q99558	947 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	LARP6	Q9BRS8	491 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	RIOX1	Q9H6W3	641 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	PDRG1	Q9NUG6	133 aa		11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	ADD3	Q9UEY8	706 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-208	ENST00000462970	SYNGAP1	Q96PV0	1343 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	CEP290	O15078	2479 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	SEPT4	O43236	478 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	MSC	O60682	206 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	SNAI1	O95863	264 aa	Predicted RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	HOXA13	P31271	388 aa	Predicted RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	METAP2	P50579	478 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	ALDH5A1	P51649	535 aa	Predicted RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	PDE4D	Q08499	809 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	TRAF1	Q13077	416 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	ACVR2B	Q13705	512 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	TMTC3	Q6ZXV5	915 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	DIS3L	Q8TF46	1054 aa	Known RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	LENG1	Q96BZ8	264 aa	Predicted RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	PAWR	Q96IZ0	340 aa	Known RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	SPZ1	Q9BXG8	430 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	RBM28	Q9NW13	759 aa	Known RBP	11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	FAM184B	Q9ULE4	1060 aa		11.12	□□□□□ -0.63
PSMD4-208	ENST00000462970	RARB	P10826	455 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	STK3	Q13188	491 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	GJC2	Q5T442	439 aa	Predicted RBP	11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	LHX8	Q68G74	356 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	MAMDC4	Q6UXC1	1216 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	HEATR3	Q7Z4Q2	680 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	FCHSD1	Q86WN1	690 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	FBXO16	Q8IX29	292 aa	Predicted RBP	11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	MSL3	Q8N5Y2	521 aa	Known RBP	11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.11	□□□□□ -0.63	1e-7	■■■■□ 26.1
PSMD4-208	ENST00000462970	MTMR8	Q96EF0	704 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	TAAR1	Q96RJ0	339 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	MPHOSPH6	Q99547	160 aa	Known RBP	11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	CRISPLD2	Q9H0B8	497 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	ABHD16B	Q9H3Z7	469 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	ZSWIM6	Q9HCJ5	1215 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	XPNPEP3	Q9NQH7	507 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	NRBP1	Q9UHY1	535 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	OGDHL	Q9ULD0	1010 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	LRRC37A2	A6NM11	1700 aa		11.11	□□□□□ -0.63
PSMD4-208	ENST00000462970	ASTN1	O14525	1302 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970		B4DLN1	442 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	KBTBD13	C9JR72	458 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	PPFIA3	O75145	1194 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	PGK1	P00558	417 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	IGHA2	P01877	340 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	POLR2M	P0CAP2	368 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	AKR1A1	P14550	325 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	EIF2AK2	P19525	551 aa	Known RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	CDC27	P30260	824 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	MRPL12	P52815	198 aa	Known RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	CCT2	P78371	535 aa	Known RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	CCDC144B	Q3MJ40	725 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	ARHGEF16	Q5VV41	709 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	NECAB2	Q7Z6G3	386 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	ARRDC4	Q8NCT1	418 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	RGS22	Q8NE09	1264 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	DPF3	Q92784	378 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	CUL5	Q93034	780 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	RMDN3	Q96TC7	470 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	TM6SF1	Q9BZW5	370 aa		11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	NCOA5	Q9HCD5	579 aa	Known RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970		V9GY48	417 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD4-208	ENST00000462970	CCDC196	A0A1B0GTZ2	297 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	MYCL	P12524	364 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	SMARCA1	P28370	1054 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	ADD1	P35611	737 aa	Known RBP	11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	ADCYAP1R1	P41586	468 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	AKAP17A	Q02040	695 aa	Known RBP	11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	TNFAIP2	Q03169	654 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	TOB2	Q14106	344 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	C8orf34	Q49A92	452 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	ANKLE1	Q8NAG6	615 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	SMARCC2	Q8TAQ2	1214 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	NSUN6	Q8TEA1	469 aa	Known RBP	11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	FERMT2	Q96AC1	680 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	HTATIP2	Q9BUP3	242 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	C11orf49	Q9H6J7	331 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	PDGFC	Q9NRA1	345 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	COL20A1	Q9P218	1284 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	KIAA1217	Q5T5P2	1943 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	CNTNAP5	Q8WYK1	1306 aa		11.09	□□□□□ -0.63
PSMD4-208	ENST00000462970	MYH7B	A7E2Y1	1941 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	ALPK3	Q96L96	1907 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	CPLX1	O14810	134 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	OPLAH	O14841	1288 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	C6orf222	P0C671	652 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	PDIA3	P30101	505 aa	Known RBP	11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	HSD17B4	P51659	736 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms