RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
HPS1-206ENST00000462743 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
HPS1-206ENST00000462743 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
HPS1-206ENST00000462743 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
HPS1-206ENST00000462743 OPLAHO14841 1288 aa14□□□□□ -0.17
HPS1-206ENST00000462743 ACVR2BQ13705 512 aa14□□□□□ -0.17
HPS1-206ENST00000462743 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
HPS1-206ENST00000462743 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
HPS1-206ENST00000462743 FAM184BQ9ULE4 1060 aa14□□□□□ -0.17
HPS1-206ENST00000462743 NID2Q14112 1375 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 B4DLN1 442 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 SEC24BO95487 1268 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 RXRAP19793 462 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 EDNRBP24530 442 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 CNGA1P29973 690 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 HSD17B4P51659 736 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 MRPL12P52815 198 aaKnown RBP13.99□□□□□ -0.17
HPS1-206ENST00000462743 FGD1P98174 961 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 RTN1Q16799 776 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 SLC30A10Q6XR72 485 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 MICU3Q86XE3 530 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 ARRDC4Q8NCT1 418 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 BRF1Q92994 677 aa13.99□□□□□ -0.17
HPS1-206ENST00000462743 RBM47A0AV96 593 aaKnown RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 AKR1A1P14550 325 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 CDC27P30260 824 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 NKX3-2P78367 333 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 IQSEC1Q6DN90 963 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 HOMER1Q86YM7 354 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
HPS1-206ENST00000462743 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
HPS1-206ENST00000462743 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 CEP290O15078 2479 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 RARBP10826 455 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 COL6A1P12109 1028 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 CALML3P27482 149 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 ADD1P35611 737 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 TAPT1Q6NXT6 567 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 NSUN6Q8TEA1 469 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 PAWRQ96IZ0 340 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 MPHOSPH6Q99547 160 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 SEC63Q9UGP8 760 aaKnown RBP13.97□□□□□ -0.17
HPS1-206ENST00000462743 Q9Y3F1 56 aa13.97□□□□□ -0.17
HPS1-206ENST00000462743 GOLGA8AA7E2F4 631 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 GOLGA8BA8MQT2 603 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
HPS1-206ENST00000462743 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 PIK3CDO00329 1044 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 CFBP00751 764 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
HPS1-206ENST00000462743 NTRK3Q16288 839 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 CCDC144BQ3MJ40 725 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
HPS1-206ENST00000462743 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
HPS1-206ENST00000462743 KLHDC9Q8NEP7 349 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.17
HPS1-206ENST00000462743 PDRG1Q9NUG6 133 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 COL20A1Q9P218 1284 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 CENPFP49454 3210 aa13.96□□□□□ -0.17
HPS1-206ENST00000462743 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 DNM1LO00429 736 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 ADAMTS4O75173 837 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 RMDN3Q96TC7 470 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 TSEN34Q9BSV6 310 aaKnown RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 HTATIP2Q9BUP3 242 aa13.95□□□□□ -0.18
HPS1-206ENST00000462743 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 GNEQ9Y223 722 aaKnown RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 V9GY48 417 aaPredicted RBP13.95□□□□□ -0.18
HPS1-206ENST00000462743 NR3C2P08235 984 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 IFNAR1P17181 557 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 CST5P28325 142 aaPredicted RBP13.94□□□□□ -0.18
HPS1-206ENST00000462743 GJA9P57773 515 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 PDE4DQ08499 809 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 LRRC41Q15345 812 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
HPS1-206ENST00000462743 RNF180Q86T96 592 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms