RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 LIFRP42702 1097 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 MRPL12P52815 198 aaKnown RBP21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 COL9A3Q14050 684 aaPredicted RBP21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 TBC1D5Q92609 795 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 MAP3K14Q99558 947 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 TSEN34Q9BSV6 310 aaKnown RBP21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 LRRC2Q9BYS8 371 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 PDGFCQ9NRA1 345 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 PCDHA1Q9Y5I3 950 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 ALPK3Q96L96 1907 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 MCM3APO60318 1980 aa21.94■■□□□ 1.1
SLC6A1-204ENST00000462473 GJA9P57773 515 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 RTP1P59025 263 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 PDE4DQ08499 809 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 TRAF1Q13077 416 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 KRT32Q14532 448 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 SLC35G1Q2M3R5 365 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 TSGA10IPQ3SY00 556 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 HABP4Q5JVS0 413 aaKnown RBP21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 IQSEC1Q6DN90 963 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 TAPT1Q6NXT6 567 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 KLHDC9Q8NEP7 349 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 ATP11BQ9Y2G3 1177 aa21.93■■□□□ 1.1
SLC6A1-204ENST00000462473 MYADML2A6NDP7 307 aa21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 CYTH3O43739 400 aa21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 KCNA10Q16322 511 aa21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 PCSK9Q8NBP7 692 aaKnown RBP21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 SYTL5Q8TDW5 730 aaPredicted RBP21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 UPF3AQ9H1J1 476 aaKnown RBP21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 SLC12A7Q9Y666 1083 aa21.92■■□□□ 1.1
SLC6A1-204ENST00000462473 PNMA6FA0A0J9YX94 578 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 A0A1W2PQ45 241 aaPredicted RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 A0A1W2PQY0 241 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 MOXD2PA6NHM9 499 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 PPP1R11O60927 126 aaPredicted RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 REC8O95072 547 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 CFBP00751 764 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 CALM1P0DP23 149 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 CALM2P0DP24 149 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 CALM3P0DP25 149 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 SMPD1P17405 629 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 CST5P28325 142 aaPredicted RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 ACLYP53396 1101 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 IRX5P78411 483 aaPredicted RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 ADCK5Q3MIX3 580 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 GNASQ5JWF2 1037 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 DHX32Q7L7V1 743 aaKnown RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 PIBF1Q8WXW3 757 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 TAAR1Q96RJ0 339 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 AP5M1Q9H0R1 490 aa21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 GNEQ9Y223 722 aaKnown RBP21.91■■□□□ 1.1
SLC6A1-204ENST00000462473 RXRAP19793 462 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 GNAQP50148 359 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 CCSAPQ6IQ19 270 aaPredicted RBP21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 SYNE3Q6ZMZ3 975 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 TLK2Q86UE8 772 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 NSUN6Q8TEA1 469 aaKnown RBP21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 LZTS2Q9BRK4 669 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 STARD7Q9NQZ5 370 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 RBM27Q9P2N5 1060 aaKnown RBP21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 PRKAG2Q9UGJ0 569 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 LCTP09848 1927 aa21.9■■□□□ 1.1
SLC6A1-204ENST00000462473 DYNC1LI2O43237 492 aaPredicted RBP21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 EDNRBP24530 442 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 SMARCA1P28370 1054 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 EXOSC10Q01780 885 aaKnown RBP21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 SNX17Q15036 470 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 TRIM60Q495X7 471 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 C1orf53Q5VUE5 145 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 VTI1AQ96AJ9 217 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 RRP36Q96EU6 259 aaKnown RBP21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 WDR11Q9BZH6 1224 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 COL20A1Q9P218 1284 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 Q9Y3F1 56 aa21.89■■□□□ 1.09
SLC6A1-204ENST00000462473 ASGR1P07306 291 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 HMGB1P09429 215 aaKnown RBP21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 HSPA4P34932 840 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 BEX3Q00994 111 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 ARHGEF16Q5VV41 709 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 SGMS1Q86VZ5 419 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 RAB11FIP4Q86YS3 637 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 GLT1D1Q96MS3 346 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 RMDN3Q96TC7 470 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 SPZ1Q9BXG8 430 aa21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 MAP3K20Q9NYL2 800 aaKnown RBP21.88■■□□□ 1.09
SLC6A1-204ENST00000462473 RBM47A0AV96 593 aaKnown RBP21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 OPLAHO14841 1288 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 PLEKHA8P1O95397 391 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 NKX3-2P78367 333 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 DUSP28Q4G0W2 176 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 TMEM63BQ5T3F8 832 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 MICU3Q86XE3 530 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 SAMD3Q8N6K7 520 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 FANCBQ8NB91 859 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 KCNB2Q92953 911 aa21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 SEC63Q9UGP8 760 aaKnown RBP21.87■■□□□ 1.09
SLC6A1-204ENST00000462473 MYH6P13533 1939 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 CTAGE5O15320 804 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms