RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ITGB4P16144 1822 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 CCDC7Q96M83 1385 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 TOGARAM1Q9Y4F4 1720 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 PNPLA7Q6ZV29 1317 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 A0A1W2PQH9 124 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
COPS3-204ENST00000462236 DYNC1LI2O43237 492 aaPredicted RBP6.85□□□□□ -1.31
COPS3-204ENST00000462236 KLF4O43474 513 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 ACRP10323 421 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 CYP7A1P22680 504 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 GBP1P32455 592 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 LETMD1Q6P1Q0 360 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 TOM1L2Q6ZVM7 507 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 ANKS3Q6ZW76 656 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 TTC6Q86TZ1 520 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 FAM169BQ8N8A8 192 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 NLGN2Q8NFZ4 835 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 GATA6Q92908 595 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 SLC9A7Q96T83 725 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 DBNDD2Q9BQY9 259 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 METTL22Q9BUU2 404 aaPredicted RBP6.85□□□□□ -1.31
COPS3-204ENST00000462236 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 ACTR10Q9NZ32 417 aa6.85□□□□□ -1.31
COPS3-204ENST00000462236 HMX2A2RU54 273 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
COPS3-204ENST00000462236 EXOC5O00471 708 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 NFIAQ12857 509 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 FXNQ16595 210 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 DNAJB8Q8NHS0 232 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 PPP1R13LQ8WUF5 828 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 SMARCC1Q92922 1105 aaPredicted RBP6.84□□□□□ -1.31
COPS3-204ENST00000462236 MKL1Q969V6 931 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 KIF2CQ99661 725 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 SIRPGQ9P1W8 387 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 MAP2P11137 1827 aaKnown RBP6.84□□□□□ -1.31
COPS3-204ENST00000462236 ARFGEF1Q9Y6D6 1849 aa6.84□□□□□ -1.31
COPS3-204ENST00000462236 SLITRK5O94991 958 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 CHMP4BP1P59074 171 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 RNF4P78317 190 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 CDK5R2Q13319 367 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 RAB33AQ14088 237 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 DOC2BQ14184 412 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 MIPEPQ99797 713 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 DPH2Q9BQC3 489 aaPredicted RBP6.83□□□□□ -1.32
COPS3-204ENST00000462236 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 MAPK8IP1Q9UQF2 711 aa6.83□□□□□ -1.32
COPS3-204ENST00000462236 CCDC88AQ3V6T2 1871 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 U2SURPO15042 1029 aaKnown RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 CLEC3AO75596 197 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 UBOX5O94941 541 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 EOMESO95936 686 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 FSTP19883 344 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 PMS1P54277 932 aaKnown RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 NCAPHQ15003 741 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 RSPO4Q2I0M5 234 aaPredicted RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 RUFY4Q6ZNE9 571 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 RNF141Q8WVD5 230 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 MKNK2Q9HBH9 465 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 LGR6Q9HBX8 967 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 SUCOQ9UBS9 1254 aaKnown RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 N4BP2Q86UW6 1770 aaPredicted RBP6.82□□□□□ -1.32
COPS3-204ENST00000462236 NSD2O96028 1365 aa6.82□□□□□ -1.32
COPS3-204ENST00000462236 FAM87AP0C7U9 286 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 POLD1P28340 1107 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 SERINC3Q13530 473 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 PPP2R5EQ16537 467 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 BAHD1Q8TBE0 780 aaPredicted RBP6.81□□□□□ -1.32
COPS3-204ENST00000462236 PRDM5Q9NQX1 630 aaPredicted RBP6.81□□□□□ -1.32
COPS3-204ENST00000462236 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
COPS3-204ENST00000462236 DYRK3O43781 588 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 IGSF3O75054 1194 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 ADMP35318 185 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 PDE4DIPQ5VU43 2346 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 GPAT2Q6NUI2 795 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 PKD1L3Q7Z443 1732 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 XAGE3Q8WTP9 111 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 HNRNPLLQ8WVV9 542 aaKnown RBP6.8□□□□□ -1.32
COPS3-204ENST00000462236 VWCEQ96DN2 955 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 KREMEN1Q96MU8 473 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 SLC6A18Q96N87 628 aa6.8□□□□□ -1.32
COPS3-204ENST00000462236 DNAJC2Q99543 621 aaKnown RBP6.8□□□□□ -1.32
COPS3-204ENST00000462236 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms