RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 MCCP23508 829 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 TFF2Q03403 129 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
CBX3-205ENST00000462165 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 DUSP28Q4G0W2 176 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 RCSD1Q6JBY9 416 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 KIAA1211Q6ZU35 1233 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
CBX3-205ENST00000462165 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
CBX3-205ENST00000462165 PPARAQ07869 468 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
CBX3-205ENST00000462165 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
CBX3-205ENST00000462165 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 KCTD1Q719H9 257 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
CBX3-205ENST00000462165 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 NAPBQ9H115 298 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
CBX3-205ENST00000462165 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 PTPRSQ13332 1948 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 TNKSO95271 1327 aa12.87□□□□□ -0.35
CBX3-205ENST00000462165 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 CA3P07451 260 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 CYP2C9P11712 490 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 CPT1AP50416 773 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 KCNQ1P51787 676 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 SNAP25P60880 206 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 TSHZ3Q63HK5 1081 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 PURBQ96QR8 312 aaKnown RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 SEC62Q99442 399 aaKnown RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 TRIP12Q14669 1992 aaPredicted RBP12.86□□□□□ -0.35
CBX3-205ENST00000462165 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
CBX3-205ENST00000462165 RBM47A0AV96 593 aaKnown RBP12.85□□□□□ -0.35
CBX3-205ENST00000462165 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 RFXAPO00287 272 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 ICAM1P05362 532 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 ACTN1P12814 892 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 RFC2P35250 354 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 NOVP48745 357 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 ALDH5A1P51649 535 aaPredicted RBP12.85□□□□□ -0.35
CBX3-205ENST00000462165 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
CBX3-205ENST00000462165 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 DEFB128Q7Z7B8 93 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 MTG1Q9BT17 334 aaPredicted RBP12.85□□□□□ -0.35
CBX3-205ENST00000462165 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 RANBP17Q9H2T7 1088 aaKnown RBP12.85□□□□□ -0.35
CBX3-205ENST00000462165 DCTPP1Q9H773 170 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 IL17RBQ9NRM6 502 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 COG5Q9UP83 839 aa12.85□□□□□ -0.35
CBX3-205ENST00000462165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
CBX3-205ENST00000462165 COL4A4P53420 1690 aaPredicted RBP12.84□□□□□ -0.35
CBX3-205ENST00000462165 MYL3P08590 195 aa12.84□□□□□ -0.35
CBX3-205ENST00000462165 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
CBX3-205ENST00000462165 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
CBX3-205ENST00000462165 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
CBX3-205ENST00000462165 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
CBX3-205ENST00000462165 EPOPA6NHQ4 379 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
CBX3-205ENST00000462165 NMT2O60551 498 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 TAP1Q03518 808 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
CBX3-205ENST00000462165 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 OR6J1Q8NGC5 347 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 CERS4Q9HA82 394 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
CBX3-205ENST00000462165 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
CBX3-205ENST00000462165 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 NFIBO00712 420 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 FOXP2O15409 715 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 TLL1O43897 1013 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 KPNA6O60684 536 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 PTPN11Q06124 597 aaPredicted RBP12.82□□□□□ -0.36
CBX3-205ENST00000462165 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 KRT40Q6A162 431 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 HERC6Q8IVU3 1022 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms