RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KLRK1P26718 216 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 CXCR5P32302 372 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 ASIC1P78348 528 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 UBE4AQ14139 1066 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 CABP7Q86V35 215 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 PCDHA13Q9Y5I0 950 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
HPS3-204ENST00000462030 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 FIGNQ5HY92 759 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 FAM114A1Q8IWE2 563 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 PNMA1Q8ND90 353 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 CRNKL1Q9BZJ0 848 aaKnown RBP20.53■□□□□ 0.88
HPS3-204ENST00000462030 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 KIF11P52732 1056 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 PPFIA1Q13136 1202 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 ICE2Q659A1 982 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 ZNF572Q7Z3I7 529 aaPredicted RBP20.53■□□□□ 0.88
HPS3-204ENST00000462030 HEATR3Q7Z4Q2 680 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 TADA2BQ86TJ2 420 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 TSEN2Q8NCE0 465 aaKnown RBP20.53■□□□□ 0.88
HPS3-204ENST00000462030 OSBPL9Q96SU4 736 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
HPS3-204ENST00000462030 EXOC5O00471 708 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 USO1O60763 962 aaKnown RBP20.52■□□□□ 0.88
HPS3-204ENST00000462030 FKBP15Q5T1M5 1219 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 TTC19Q6DKK2 380 aaPredicted RBP20.52■□□□□ 0.88
HPS3-204ENST00000462030 CAPS2Q9BXY5 557 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 FAM207AQ9NSI2 230 aaPredicted RBP20.52■□□□□ 0.88
HPS3-204ENST00000462030 PLAGL2Q9UPG8 496 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 NCK2O43639 380 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 CYTH3O43739 400 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 EIF4A3P38919 411 aaKnown RBP20.52■□□□□ 0.88
HPS3-204ENST00000462030 TFAP4Q01664 338 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 KIAA0895Q8NCT3 520 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 SH3GL2Q99962 352 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 SEMA6BQ9H3T3 888 aa20.52■□□□□ 0.88
HPS3-204ENST00000462030 A0A0G2JS52 829 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 ADAMTS2O95450 1211 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 PRDX5P30044 214 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 HAUS3Q68CZ6 603 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
HPS3-204ENST00000462030 MAD2L2Q9UI95 211 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 CPP00450 1065 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 HNRNPH3P31942 346 aaKnown RBP20.51■□□□□ 0.87
HPS3-204ENST00000462030 GNGT1P63211 74 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 ITIH3Q06033 890 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 SEMA3FQ13275 785 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 SALL4Q9UJQ4 1053 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 SIK3Q9Y2K2 1263 aa20.51■□□□□ 0.87
HPS3-204ENST00000462030 A0A087WUV0 522 aaPredicted RBP20.5■□□□□ 0.87
HPS3-204ENST00000462030 STXBP3O00186 592 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 CERS3Q8IU89 383 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 MICALL1Q8N3F8 863 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 DAGLBQ8NCG7 672 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 BCAS4Q8TDM0 211 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 CCDC47Q96A33 483 aaKnown RBP20.5■□□□□ 0.87
HPS3-204ENST00000462030 ARL8AQ96BM9 186 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 C7orf25Q9BPX7 421 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 CUEDC2Q9H467 287 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 SLC39A2Q9NP94 309 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 HYOU1Q9Y4L1 999 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 EIF3HO15372 352 aaKnown RBP eCLIP20.5■□□□□ 0.87
HPS3-204ENST00000462030 PRPHP41219 470 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 GRM4Q14833 912 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 TTMPQ5BVD1 217 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 ANKRD13CQ8N6S4 541 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 DEF6Q9H4E7 631 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 TCP11L1Q9NUJ3 509 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
HPS3-204ENST00000462030 GOLGA8KD6RF30 607 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 PRLRP16471 622 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 SBK1Q52WX2 424 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 MYH14Q7Z406 1995 aaKnown RBP20.49■□□□□ 0.87
HPS3-204ENST00000462030 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 DYNLL2Q96FJ2 89 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 MAGEF1Q9HAY2 307 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 STIM2Q9P246 746 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 JAG2Q9Y219 1238 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 LAD1O00515 517 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 AKR1B10O60218 316 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 OR52Z1P0C646 297 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 EPHB4P54760 987 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 VWA3BQ502W6 1294 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 CCDC181Q5TID7 509 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 FAM169AQ9Y6X4 670 aa20.49■□□□□ 0.87
HPS3-204ENST00000462030 USP17L3A6NCW0 530 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 USP17L4A6NCW7 530 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 LRRC53A6NM62 1247 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms