RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
SF3A3-203ENST00000461869 RAB30Q15771 203 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 IFNL3Q8IZI9 196 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 NEDD1Q8NHV4 660 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 HERVK_113Q902F9 699 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 AGBL1Q96MI9 1066 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
SF3A3-203ENST00000461869 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
SF3A3-203ENST00000461869 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
SF3A3-203ENST00000461869 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 MSRAQ9UJ68 235 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 PRUNE2Q8WUY3 3088 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 SOWAHBA6NEL2 793 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 ASB14A6NK59 587 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 CABYRO75952 493 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 FGBP02675 491 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 CASTP20810 708 aaKnown RBP18.11■□□□□ 0.49
SF3A3-203ENST00000461869 TFAP4Q01664 338 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 PDE4BQ07343 736 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 ITGA7Q13683 1181 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 BLOC1S2Q6QNY1 142 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 TLK2Q86UE8 772 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 ATXN2LQ8WWM7 1075 aaKnown RBP18.11■□□□□ 0.49
SF3A3-203ENST00000461869 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 AP5M1Q9H0R1 490 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 HIPK3Q9H422 1215 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
SF3A3-203ENST00000461869 ASTN1O14525 1302 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
SF3A3-203ENST00000461869 SPTBN5Q9NRC6 3674 aaKnown RBP18.1■□□□□ 0.49
SF3A3-203ENST00000461869 PLIN4Q96Q06 1357 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 ZNF536O15090 1300 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 ZEB2O60315 1214 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 SLC3A2P08195 630 aaKnown RBP18.1■□□□□ 0.49
SF3A3-203ENST00000461869 IGFBP4P22692 258 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 SLC1A4P43007 532 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 FSCN1Q16658 493 aaKnown RBP18.1■□□□□ 0.49
SF3A3-203ENST00000461869 TKFCQ3LXA3 575 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 TRERF1Q96PN7 1200 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 NKX2-4Q9H2Z4 354 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 CXXC1Q9P0U4 656 aaPredicted RBP18.1■□□□□ 0.49
SF3A3-203ENST00000461869 MCM3APO60318 1980 aa18.1■□□□□ 0.49
SF3A3-203ENST00000461869 UMODL1Q5DID0 1318 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
SF3A3-203ENST00000461869 DYNC1LI2O43237 492 aaPredicted RBP18.09■□□□□ 0.49
SF3A3-203ENST00000461869 ALAS1P13196 640 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 SMPD1P17405 629 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 CCDC85BQ15834 202 aaPredicted RBP18.09■□□□□ 0.49
SF3A3-203ENST00000461869 RUFY3Q7L099 469 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 OTOP2Q7RTS6 562 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 ASB2Q96Q27 587 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 UPF3BQ9BZI7 483 aaKnown RBP18.09■□□□□ 0.49
SF3A3-203ENST00000461869 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 THEGQ9P2T0 379 aa18.09■□□□□ 0.49
SF3A3-203ENST00000461869 GRIN2DO15399 1336 aa18.08■□□□□ 0.49
SF3A3-203ENST00000461869 PTGS1P23219 599 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 CCL23P55773 120 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 PPARAQ07869 468 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 TRDNQ13061 729 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 ANKRD1Q15327 319 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 IQSEC1Q6DN90 963 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 SEZ6LQ9BYH1 1024 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 PDGFCQ9NRA1 345 aa18.08■□□□□ 0.48
SF3A3-203ENST00000461869 DDX49Q9Y6V7 483 aaKnown RBP18.08■□□□□ 0.48
SF3A3-203ENST00000461869 E7EWF7 191 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 B4GALT4O60513 344 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 SNAP25P60880 206 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
SF3A3-203ENST00000461869 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 KCTD1Q719H9 257 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 RALYLQ86SE5 291 aaKnown RBP18.07■□□□□ 0.48
SF3A3-203ENST00000461869 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 RNF41Q9H4P4 317 aaPredicted RBP18.07■□□□□ 0.48
SF3A3-203ENST00000461869 STX8Q9UNK0 236 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 YBX2Q9Y2T7 364 aaKnown RBP18.07■□□□□ 0.48
SF3A3-203ENST00000461869 Q9Y3F1 56 aa18.07■□□□□ 0.48
SF3A3-203ENST00000461869 PLA2G6O60733 806 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
SF3A3-203ENST00000461869 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 NT5C2P49902 561 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 PSMC6P62333 389 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 MUM1L1Q5H9M0 696 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 TAPT1Q6NXT6 567 aa18.06■□□□□ 0.48
SF3A3-203ENST00000461869 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
SF3A3-203ENST00000461869 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
SF3A3-203ENST00000461869 NOC4LQ9BVI4 516 aaKnown RBP18.06■□□□□ 0.48
SF3A3-203ENST00000461869 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms