RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 PCDHGA6Q9Y5G7 932 aa8.79□□□□□ -1
LRCH3-210ENST00000461674 PCDHGA3Q9Y5H0 932 aa8.79□□□□□ -1
LRCH3-210ENST00000461674 PCDHGA2Q9Y5H1 932 aa8.79□□□□□ -1
LRCH3-210ENST00000461674 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 HIP1RO75146 1068 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
LRCH3-210ENST00000461674 MLLT1Q03111 559 aaPredicted RBP8.78□□□□□ -1
LRCH3-210ENST00000461674 IKBKEQ14164 716 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 STYK1Q6J9G0 422 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 CFAP161Q6P656 301 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 RSRC2Q7L4I2 434 aaKnown RBP8.78□□□□□ -1
LRCH3-210ENST00000461674 SLC41A1Q8IVJ1 513 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 CCDC144CPQ8IYA2 1237 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 NAXEQ8NCW5 288 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 DEPTORQ8TB45 409 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 GCC1Q96CN9 775 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 PPM1MQ96MI6 270 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 SERINC2Q96SA4 455 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 CABP5Q9NP86 173 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 AKT3Q9Y243 479 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 PCDHGC4Q9Y5F7 938 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 PCDHA9Q9Y5H5 950 aa8.78□□□□□ -1
LRCH3-210ENST00000461674 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1
LRCH3-210ENST00000461674 hCG_1642624A0A1W2PR95 340 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 J3KRW8 73 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 CLEC3AO75596 197 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 UBOX5O94941 541 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 KPNA1P52294 538 aaPredicted RBP8.77□□□□□ -1.01
LRCH3-210ENST00000461674 TNP2Q05952 138 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 PRR16Q569H4 304 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 DCAF15Q66K64 600 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 MZT2BQ6NZ67 158 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 HFE2Q6ZVN8 426 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
LRCH3-210ENST00000461674 CHTF18Q8WVB6 975 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 CCDC140Q96MF4 163 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 ZC3H12CQ9C0D7 883 aaKnown RBP8.77□□□□□ -1.01
LRCH3-210ENST00000461674 RASSF1Q9NS23 344 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 MARK1Q9P0L2 795 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 B4GALT6Q9UBX8 382 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 ASXL2Q76L83 1435 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 PEG3Q9GZU2 1588 aa8.77□□□□□ -1.01
LRCH3-210ENST00000461674 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 KLHL33A6NCF5 533 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 RASA4BC9J798 803 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 hCG_1984214I3L0E3 225 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 RASA4O43374 803 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 ITGBL1O95965 494 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 EIF2AK2P19525 551 aaKnown RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 RRM1P23921 792 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 RXRGP48443 463 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 LRRC32Q14392 662 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 PCSK7Q16549 785 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 PDXDC1Q6P996 788 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 MCATQ8IVS2 390 aaKnown RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 DIO2Q92813 273 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 SLC5A5Q92911 643 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 TRIM63Q969Q1 353 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 SLC30A3Q99726 388 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 WDR12Q9GZL7 423 aaKnown RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 SOX17Q9H6I2 414 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 AGO4Q9HCK5 861 aaKnown RBP8.76□□□□□ -1.01
LRCH3-210ENST00000461674 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
LRCH3-210ENST00000461674 FAM177BA6PVY3 158 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 TRAF5O00463 557 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 EIF4EBP3O60516 100 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 PQBP1O60828 265 aaKnown RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 SOD2P04179 222 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 MAPTP10636 758 aaKnown RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 HOXC12P31275 282 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 CHKAP35790 457 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 MAPK9P45984 424 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 FAM193AP78312 1265 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 GUCY1A3Q02108 690 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 IFIT5Q13325 482 aaKnown RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 ZNF267Q14586 743 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 SF1Q15637 639 aaKnown RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 PLA2G4EQ3MJ16 856 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 SLC35F1Q5T1Q4 408 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 GTF2IRD2BQ6EKJ0 949 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 TLDC1Q6P9B6 456 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 GTF2IRD2Q86UP8 949 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 ARHGEF39Q8N4T4 335 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 ZBTB34Q8NCN2 500 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 FAM156AQ8NDB6 213 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 TEKT5Q96M29 485 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 CCDC86Q9H6F5 360 aaKnown RBP8.75□□□□□ -1.01
LRCH3-210ENST00000461674 LRCH1Q9Y2L9 728 aa8.75□□□□□ -1.01
LRCH3-210ENST00000461674 SLC45A1Q9Y2W3 748 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms