RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
TMEM39A-203ENST00000461654 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
TMEM39A-203ENST00000461654 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
TMEM39A-203ENST00000461654 DOCK3Q8IZD9 2030 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 ZBTB5O15062 677 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 PLA2G6O60733 806 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 MCM4P33991 863 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 KRT2P35908 639 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 NAPAP54920 295 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 KRT85P78386 507 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 KIAA1755Q5JYT7 1200 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 GALNT17Q6IS24 598 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.383e-8■■■■■ 71.9
TMEM39A-203ENST00000461654 PHF20Q9BVI0 1012 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 BTBD7Q9P203 1132 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
TMEM39A-203ENST00000461654 BRCA2P51587 3418 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 DSG3P32926 999 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 RGS2P41220 211 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 WWC2Q6AWC2 1192 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 TRIB2Q92519 343 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 C6orf50Q9HD87 102 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 PLXNB2O15031 1838 aa17.41■□□□□ 0.38
TMEM39A-203ENST00000461654 STXBP3O00186 592 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 CYP2B6P20813 491 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.381e-9■■■■□ 21.9
TMEM39A-203ENST00000461654 GNA11P29992 359 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 CDC37Q16543 378 aaPredicted RBP17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 MB21D1Q8N884 522 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 KIFC2Q96AC6 838 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 TANGO6Q9C0B7 1094 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 PRR12Q9ULL5 1215 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 RPTORQ8N122 1335 aa17.4■□□□□ 0.38
TMEM39A-203ENST00000461654 SLC15A5A6NIM6 579 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 PTPREP23469 700 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 SHCBP1Q8NEM2 672 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 AMNQ9BXJ7 453 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
TMEM39A-203ENST00000461654 BTBD18B2RXH4 712 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 STRNO43815 780 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 HOXC6P09630 235 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 PRPF38AQ8NAV1 312 aaKnown RBP17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 APBA2Q99767 749 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 GLT8D2Q9H1C3 349 aa17.38■□□□□ 0.37
TMEM39A-203ENST00000461654 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 FLOT1O75955 427 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 FDX1P10109 184 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 TRIM32Q13049 653 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 GRB14Q14449 540 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 ANKLE1Q8NAG6 615 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 DAGLBQ8NCG7 672 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 MOV10L1Q9BXT6 1211 aaKnown RBP17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 SPATC1LQ9H0A9 340 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 PCDHA1Q9Y5I3 950 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 RLFQ13129 1914 aa17.37■□□□□ 0.37
TMEM39A-203ENST00000461654 FIBPO43427 364 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 IGHA2P01877 340 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 ADCY7P51828 1080 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 MROH8Q9H579 483 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 TFIP11Q9UBB9 837 aaKnown RBP17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 IVNS1ABPQ9Y6Y0 642 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 MYH6P13533 1939 aa17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
TMEM39A-203ENST00000461654 CCDC194A0A1B0GVG4 234 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms