RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 FGD4Q96M96 766 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 MAF1Q9H063 256 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
SSBP1-202ENST00000461433 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
SSBP1-202ENST00000461433 ASTN1O14525 1302 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 PFASO15067 1338 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 K7ELQ4 463 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-202ENST00000461433 MEIS2O14770 477 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 ADAMTS3O15072 1205 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 IGHA2P01877 340 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 HSD17B4P51659 736 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 PRMT2P55345 433 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 CNTN2Q02246 1040 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 IRF5Q13568 498 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 FAM133AQ8N9E0 248 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 CFBP00751 764 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
SSBP1-202ENST00000461433 CYP2B6P20813 491 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 RGS2P41220 211 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 NAPAP54920 295 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 PPP1R18Q6NYC8 613 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 DPP9Q86TI2 863 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 SYTL5Q8TDW5 730 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-202ENST00000461433 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 MAP3K20Q9NYL2 800 aaKnown RBP12.99□□□□□ -0.33
SSBP1-202ENST00000461433 FLRT1Q9NZU1 646 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 VPS54Q9P1Q0 977 aa12.99□□□□□ -0.33
SSBP1-202ENST00000461433 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 PIK3CDO00329 1044 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 CALML3P27482 149 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
SSBP1-202ENST00000461433 CCL14Q16627 93 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 USP17L6PQ6QN14 398 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 MAML3Q96JK9 1138 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 APBA2Q99767 749 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 DIS3Q9Y2L1 958 aaKnown RBP12.98□□□□□ -0.33
SSBP1-202ENST00000461433 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
SSBP1-202ENST00000461433 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 NPY5RQ15761 445 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
SSBP1-202ENST00000461433 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 MCM3APO60318 1980 aa12.97□□□□□ -0.33
SSBP1-202ENST00000461433 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
SSBP1-202ENST00000461433 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 CLK2P49760 499 aaKnown RBP12.96□□□□□ -0.33
SSBP1-202ENST00000461433 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.33
SSBP1-202ENST00000461433 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
SSBP1-202ENST00000461433 UBE2SQ16763 222 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 TRIB2Q92519 343 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 WASF1Q92558 559 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
SSBP1-202ENST00000461433 CENPFP49454 3210 aa12.96□□□□□ -0.33
SSBP1-202ENST00000461433 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 ADCY3O60266 1144 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 ELNP15502 786 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 ADCY7P51828 1080 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.34
SSBP1-202ENST00000461433 OLFML2BQ68BL8 750 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.34
SSBP1-202ENST00000461433 MAMDC4Q6UXC1 1216 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.34
SSBP1-202ENST00000461433 HSCBQ8IWL3 235 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.34
SSBP1-202ENST00000461433 RAET1EQ8TD07 263 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 CCDC12Q8WUD4 166 aaPredicted RBP12.96□□□□□ -0.34
SSBP1-202ENST00000461433 CUL5Q93034 780 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.34
SSBP1-202ENST00000461433 M0R2N6 131 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 GJB2P29033 226 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-202ENST00000461433 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
SSBP1-202ENST00000461433 TRIM32Q13049 653 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 TEX2Q8IWB9 1127 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 CCDC148Q8NFR7 591 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 DNERQ8NFT8 737 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 MORC4Q8TE76 937 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
SSBP1-202ENST00000461433 C6orf50Q9HD87 102 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
SSBP1-202ENST00000461433 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-202ENST00000461433 FRMPD4Q14CM0 1322 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 EDNRBP24530 442 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 GRK4P32298 578 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 NLRP5P59047 1200 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms