RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
GAPVD1-210ENST00000461379 NECAB1Q8N987 351 aa18.51■□□□□ 0.55
GAPVD1-210ENST00000461379 TINF2Q9BSI4 451 aa18.51■□□□□ 0.55
GAPVD1-210ENST00000461379 SLC26A6Q9BXS9 759 aa18.51■□□□□ 0.55
GAPVD1-210ENST00000461379 ASTN1O14525 1302 aa18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 PRKAR2AP13861 404 aaKnown RBP18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 AKAP17AQ02040 695 aaKnown RBP18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 MAMDC4Q6UXC1 1216 aa18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 RNF26Q9BY78 433 aaPredicted RBP18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 RBM27Q9P2N5 1060 aaKnown RBP18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 MGAMO43451 1857 aa18.5■□□□□ 0.55
GAPVD1-210ENST00000461379 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 ST18O60284 1047 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 POLR2MP0CAP2 368 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 CCL5P13501 91 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 SCG2P13521 617 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 HOXA13P31271 388 aaPredicted RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 HSD17B4P51659 736 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 GHRHRQ02643 423 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 SSRP1Q08945 709 aaKnown RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 PKN1Q16512 942 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 MSL3Q8N5Y2 521 aaKnown RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 UNC93B1Q9H1C4 597 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 MAP3K20Q9NYL2 800 aaKnown RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 COL20A1Q9P218 1284 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 ADD3Q9UEY8 706 aaKnown RBP18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 HTTP42858 3142 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 PLXNB2O15031 1838 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 ZNF236Q9UL36 1845 aa18.49■□□□□ 0.55
GAPVD1-210ENST00000461379 hCG_1984214I3L0E3 225 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 STXBP3O00186 592 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 NAPAP54920 295 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 PRAMEF19Q5SWL8 479 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 TYW1BQ6NUM6 668 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 TRIM22Q8IYM9 498 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 ZNF713Q8N859 430 aaPredicted RBP18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 TAAR1Q96RJ0 339 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 BARHL2Q9NY43 387 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 RPTORQ8N122 1335 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 SYNGAP1Q96PV0 1343 aa18.48■□□□□ 0.55
GAPVD1-210ENST00000461379 ASB14A6NK59 587 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 DTNBO60941 627 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 CDKL5O76039 1030 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 CYBAP13498 195 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 CCND3P30281 292 aaPredicted RBP18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 ALDH5A1P51649 535 aaPredicted RBP18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 ARMCX2Q7L311 632 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 TRPV1Q8NER1 839 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 DNERQ8NFT8 737 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 ZSCAN31Q96LW9 406 aaPredicted RBP18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 RNF208Q9H0X6 261 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 PSTPIP2Q9H939 334 aa18.47■□□□□ 0.55
GAPVD1-210ENST00000461379 MEIS2O14770 477 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 PPP1R18Q6NYC8 613 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 USP17L6PQ6QN14 398 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 CUL5Q93034 780 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 RMDN3Q96TC7 470 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 TMEM106CQ9BVX2 250 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.555e-11■■■■□ 24
GAPVD1-210ENST00000461379 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 NRBP1Q9UHY1 535 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 CNPY2Q9Y2B0 182 aa18.46■□□□□ 0.55
GAPVD1-210ENST00000461379 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 PIK3CDO00329 1044 aa18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 DEXIO95424 95 aa18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 FCHSD1Q86WN1 690 aa18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 MORC4Q8TE76 937 aa18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 NSUN6Q8TEA1 469 aaKnown RBP18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 PAK6Q9NQU5 681 aaPredicted RBP18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 SH2B1Q9NRF2 756 aaPredicted RBP18.45■□□□□ 0.54
GAPVD1-210ENST00000461379 DOCK3Q8IZD9 2030 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 SMCO2A6NFE2 343 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 ZNF865P0CJ78 1059 aaPredicted RBP18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 CNGA1P29973 690 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 ARHGEF16Q5VV41 709 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 CCDC83Q8IWF9 413 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 DEFB118Q96PH6 123 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 ABHD16BQ9H3Z7 469 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 RIC8AQ9NPQ8 531 aa18.44■□□□□ 0.54
GAPVD1-210ENST00000461379 B4DLN1 442 aa18.43■□□□□ 0.54
GAPVD1-210ENST00000461379 GJB1P08034 283 aa18.43■□□□□ 0.54
GAPVD1-210ENST00000461379 EIF2AK2P19525 551 aaKnown RBP18.43■□□□□ 0.54
GAPVD1-210ENST00000461379 EDNRBP24530 442 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms