RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
COL5A3-202ENST00000461214 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 SNRNP48Q6IEG0 339 aaKnown RBP16.59■□□□□ 0.25
COL5A3-202ENST00000461214 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL5A3-202ENST00000461214 HEATR3Q7Z4Q2 680 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 RIOX2Q8IUF8 465 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 ANKRD13CQ8N6S4 541 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
COL5A3-202ENST00000461214 TXNRD2Q9NNW7 524 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 RBPJLQ9UBG7 517 aa16.59■□□□□ 0.25
COL5A3-202ENST00000461214 TCHHQ07283 1943 aa16.58■□□□□ 0.25
COL5A3-202ENST00000461214 STXBP3O00186 592 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 TFRCP02786 760 aaKnown RBP16.58■□□□□ 0.24
COL5A3-202ENST00000461214 GJB2P29033 226 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 STAT3P40763 770 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 C17orf99Q6UX52 265 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 CPXCR1Q8N123 301 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 SAMD3Q8N6K7 520 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 PIBF1Q8WXW3 757 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
COL5A3-202ENST00000461214 hCG_1642624A0A1W2PR95 340 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 PDIA4P13667 645 aaKnown RBP16.57■□□□□ 0.24
COL5A3-202ENST00000461214 PDCP20941 246 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 NAPAP54920 295 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 SNAP25P60880 206 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 PLS1Q14651 629 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 USH1GQ495M9 461 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL5A3-202ENST00000461214 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
COL5A3-202ENST00000461214 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 MROH8Q9H579 483 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 MTMR10Q9NXD2 777 aa16.57■□□□□ 0.24
COL5A3-202ENST00000461214 ZMYND8Q9ULU4 1186 aaPredicted RBP16.57■□□□□ 0.24
COL5A3-202ENST00000461214 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
COL5A3-202ENST00000461214 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 SGPL1O95470 568 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 ALAS1P13196 640 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 GHRHRQ02643 423 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 TRIM29Q14134 588 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 C7orf61Q8IZ16 206 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
COL5A3-202ENST00000461214 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
COL5A3-202ENST00000461214 RNF146Q9NTX7 359 aa16.56■□□□□ 0.24
COL5A3-202ENST00000461214 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
COL5A3-202ENST00000461214 PFASO15067 1338 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 FRMPD3Q5JV73 1810 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 CALML3P27482 149 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 MAPK4P31152 587 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 PRKCZQ05513 592 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 GPR153Q6NV75 609 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 COA7Q96BR5 231 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 PHF20Q9BVI0 1012 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 ZMYND12Q9H0C1 365 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 MAP3K20Q9NYL2 800 aaKnown RBP16.55■□□□□ 0.24
COL5A3-202ENST00000461214 WDR81Q562E7 1941 aa16.55■□□□□ 0.24
COL5A3-202ENST00000461214 GNA11P29992 359 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 ADCY7P51828 1080 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 TYW1BQ6NUM6 668 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 BICD2Q8TD16 824 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 CUL5Q93034 780 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 DEFB118Q96PH6 123 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 C6orf50Q9HD87 102 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
COL5A3-202ENST00000461214 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 OPLAHO14841 1288 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 MMP1P03956 469 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 SYN1P17600 705 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 ERCC3P19447 782 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 NCAPG2Q86XI2 1143 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 CLEC4DQ8WXI8 215 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
COL5A3-202ENST00000461214 GDF15Q99988 308 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 GABRQQ9UN88 632 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
COL5A3-202ENST00000461214 NFIBO00712 420 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 ELNP15502 786 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 HSD17B4P51659 736 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
COL5A3-202ENST00000461214 Q3C1V9 767 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms