RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 BRDTQ58F21 947 aaPredicted RBP20.48■□□□□ 0.87
TOP3A-202ENST00000461127 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
TOP3A-202ENST00000461127 PRR33A8MZF0 331 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 BAIAP3O94812 1187 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 MYL3P08590 195 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 KCNJ6P48051 423 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 PURAQ00577 322 aaKnown RBP20.47■□□□□ 0.87
TOP3A-202ENST00000461127 BFSP2Q13515 415 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 MTG1Q9BT17 334 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-202ENST00000461127 CYP39A1Q9NYL5 469 aa20.47■□□□□ 0.87
TOP3A-202ENST00000461127 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
TOP3A-202ENST00000461127 IQCF3P0C7M6 154 aa20.46■□□□□ 0.87
TOP3A-202ENST00000461127 ADD3Q9UEY8 706 aaKnown RBP20.46■□□□□ 0.87
TOP3A-202ENST00000461127 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
TOP3A-202ENST00000461127 ZNF536O15090 1300 aa20.46■□□□□ 0.87
TOP3A-202ENST00000461127 RAD50Q92878 1312 aa20.46■□□□□ 0.87
TOP3A-202ENST00000461127 PRDM1O75626 825 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 ARHGEF15O94989 841 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 TSPY3P0CV98 308 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 TSPY8P0CW00 308 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 SLC1A4P43007 532 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 TDO2P48775 406 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 NSMFQ6X4W1 530 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 NOD1Q9Y239 953 aa20.45■□□□□ 0.86
TOP3A-202ENST00000461127 LPXNO60711 386 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 NBPF20Q3BBV1 942 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 NFRKBQ6P4R8 1299 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 GJD3Q8N144 294 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 MORC4Q8TE76 937 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 CD320Q9NPF0 282 aa20.44■□□□□ 0.86
TOP3A-202ENST00000461127 KPNA6O60684 536 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 PLA2G6O60733 806 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 ALADP13716 330 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 PTPN11Q06124 597 aaPredicted RBP20.43■□□□□ 0.86
TOP3A-202ENST00000461127 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 LRRFIP1Q32MZ4 808 aaKnown RBP20.43■□□□□ 0.86
TOP3A-202ENST00000461127 MUM1L1Q5H9M0 696 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 OR6J1Q8NGC5 347 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 UIMC1Q96RL1 719 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 UBE2ZQ9H832 354 aaPredicted RBP20.43■□□□□ 0.86
TOP3A-202ENST00000461127 CCPG1Q9ULG6 757 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 TANC1Q9C0D5 1861 aa20.43■□□□□ 0.86
TOP3A-202ENST00000461127 COL4A4P53420 1690 aaPredicted RBP20.42■□□□□ 0.86
TOP3A-202ENST00000461127 LOC102724159A0A0B4J2E5 919 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 APPP05067 770 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 GNAT2P19087 354 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
TOP3A-202ENST00000461127 PDE4BQ07343 736 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 PWP2Q15269 919 aaKnown RBP20.42■□□□□ 0.86
TOP3A-202ENST00000461127 NEDD1Q8NHV4 660 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 SCN10AQ9Y5Y9 1956 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 PLIN4Q96Q06 1357 aa20.42■□□□□ 0.86
TOP3A-202ENST00000461127 TET1Q8NFU7 2136 aa20.41■□□□□ 0.86
TOP3A-202ENST00000461127 SLC3A2P08195 630 aaKnown RBP20.41■□□□□ 0.86
TOP3A-202ENST00000461127 MCCP23508 829 aa20.41■□□□□ 0.86
TOP3A-202ENST00000461127 MRE11P49959 708 aa20.41■□□□□ 0.86
TOP3A-202ENST00000461127 FAM178BQ8IXR5 827 aa20.41■□□□□ 0.86
TOP3A-202ENST00000461127 NKRFO15226 690 aaKnown RBP eCLIP20.4■□□□□ 0.86
TOP3A-202ENST00000461127 ALDH5A1P51649 535 aaPredicted RBP20.4■□□□□ 0.86
TOP3A-202ENST00000461127 WDR5P61964 334 aaKnown RBP20.4■□□□□ 0.86
TOP3A-202ENST00000461127 LEXMQ3ZCV2 418 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 KCTD1Q719H9 257 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 SPRED2Q7Z698 418 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 APPBP2Q92624 585 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 CHMP4CQ96CF2 233 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 MPHOSPH6Q99547 160 aaKnown RBP20.4■□□□□ 0.86
TOP3A-202ENST00000461127 RCAN3Q9UKA8 241 aa20.4■□□□□ 0.86
TOP3A-202ENST00000461127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
TOP3A-202ENST00000461127 RBM47A0AV96 593 aaKnown RBP20.39■□□□□ 0.85
TOP3A-202ENST00000461127 LCHNA4D1U4 455 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 GPAA1O43292 621 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 KCNA5P22460 613 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 TFAP4Q01664 338 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 PPP2R5BQ15173 497 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 RCSD1Q6JBY9 416 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 CAGE1Q8TC20 777 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 AFAP1L1Q8TED9 768 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 PURBQ96QR8 312 aaKnown RBP20.39■□□□□ 0.85
TOP3A-202ENST00000461127 TGS1Q96RS0 853 aaKnown RBP20.39■□□□□ 0.85
TOP3A-202ENST00000461127 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 NACAP1Q9BZK3 213 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 EPB41L4AQ9HCS5 686 aaPredicted RBP20.39■□□□□ 0.85
TOP3A-202ENST00000461127 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 PRR12Q9ULL5 1215 aa20.39■□□□□ 0.85
TOP3A-202ENST00000461127 PARNO95453 639 aaKnown RBP20.38■□□□□ 0.85
TOP3A-202ENST00000461127 ICAM1P05362 532 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 MS4A1P11836 297 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 SNAP25P60880 206 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 BAATQ14032 418 aaPredicted RBP20.38■□□□□ 0.85
TOP3A-202ENST00000461127 OSBP2Q969R2 916 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 RAD9AQ99638 391 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms