RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 PLS1Q14651 629 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 NCAPHQ15003 741 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 PPP4R3AQ6IN85 833 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 TEKT1Q969V4 418 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 ACTN2P35609 894 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 RASSF7Q02833 373 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 GRM4Q14833 912 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 CCDC121Q6ZUS5 278 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 CDK8P49336 464 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 USH1GQ495M9 461 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 RUFY4Q6ZNE9 571 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 PARP3Q9Y6F1 533 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 ZSCAN20P17040 1043 aaPredicted RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 NTRK3Q16288 839 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 BICD1Q96G01 975 aa13.31□□□□□ -0.28
CPNE6-202ENST00000460657 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
CPNE6-202ENST00000460657 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 TCP10Q12799 353 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 UTP11Q9Y3A2 253 aaKnown RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 TTC26A0AVF1 554 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 PSMD2Q13200 908 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 LRRC41Q15345 812 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 PRR16Q569H4 304 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 GIMAP7Q8NHV1 300 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 PPM1EQ8WY54 764 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 NSRP1Q9H0G5 558 aaKnown RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 A0A1W2PQC6 194 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 RNF40O75150 1001 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 ZMYND10O75800 440 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 TTLL1O95922 423 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 GRAPQ13588 217 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 GRAPLQ8TC17 118 aaPredicted RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 COA7Q96BR5 231 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
CPNE6-202ENST00000460657 ARHGEF10LQ9HCE6 1279 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 ITIH6Q6UXX5 1313 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 NRXN3Q9Y4C0 1643 aa13.3□□□□□ -0.28
CPNE6-202ENST00000460657 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 KCNK3O14649 394 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
CPNE6-202ENST00000460657 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 COL4A3BPQ9Y5P4 624 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 ARHGEF35A5YM69 484 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 ATP2C2O75185 946 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 KIF11P52732 1056 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 KCNB1Q14721 858 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 FAM184BQ9ULE4 1060 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 STAT1P42224 750 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 SEPT2Q15019 361 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 RASGRP2Q7LDG7 609 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 PCDHA13Q9Y5I0 950 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
CPNE6-202ENST00000460657 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 GNGT1P63211 74 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
CPNE6-202ENST00000460657 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 HINFPQ9BQA5 517 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 PLEKHA4Q9H4M7 779 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 PP2D1A8MPX8 630 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 EXOC3O60645 756 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 FGFR2P21802 821 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 INPP5BP32019 993 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
CPNE6-202ENST00000460657 EPHB4P54760 987 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 C2orf54Q08AI8 447 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms