RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 USH1GQ495M9 461 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 ALG1Q9BT22 464 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 ADD3Q9UEY8 706 aaKnown RBP12.67□□□□□ -0.38
SMNDC1-203ENST00000460483 LOC102724159A0A0B4J2E5 919 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 ESYT2A0FGR8 921 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 GCOM1H8Y6P7 765 aaPredicted RBP12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 GPR25O00155 361 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 TNPO2O14787 897 aaKnown RBP12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 POLR2MP0CAP2 368 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 ERCC3P19447 782 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 PWP2Q15269 919 aaKnown RBP12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 TRMT44Q8IYL2 757 aaKnown RBP12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 AGBL1Q96MI9 1066 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 BTBD7Q9P203 1132 aa12.66□□□□□ -0.38
SMNDC1-203ENST00000460483 ZNF536O15090 1300 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 LARGE1O95461 756 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 ADCY7P51828 1080 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 RASGRP2Q7LDG7 609 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 MMP19Q99542 508 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
SMNDC1-203ENST00000460483 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 PIK3CDO00329 1044 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 GJB2P29033 226 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 TXNRD2Q9NNW7 524 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 DIS3Q9Y2L1 958 aaKnown RBP12.64□□□□□ -0.39
SMNDC1-203ENST00000460483 STXBP3O00186 592 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 CNMDO75829 334 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 CFBP00751 764 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 PTPREP23469 700 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 RGS2P41220 211 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 PSMC4P43686 418 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 SNAP25P60880 206 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 Q3C1V9 767 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 MSL3Q8N5Y2 521 aaKnown RBP12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
SMNDC1-203ENST00000460483 ASB14A6NK59 587 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 JAK2O60674 1132 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 KRT2P35908 639 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 PKN1Q16512 942 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 XRRA1Q6P2D8 792 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
SMNDC1-203ENST00000460483 MYH4Q9Y623 1939 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 CCDC194A0A1B0GVG4 234 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 STAM2O75886 525 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 MMP1P03956 469 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 XRCC5P13010 732 aaKnown RBP12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 HSD17B4P51659 736 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 GHRHRQ02643 423 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 GRB14Q14449 540 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 KRT25Q7Z3Z0 450 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 BLIDQ8IZY5 108 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 DAGLBQ8NCG7 672 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms