RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 MARF1Q9Y4F3 1742 aaKnown RBP11.18□□□□□ -0.62
EPB41-208ENST00000460378 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 BMP15O95972 392 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 THNSL1Q8IYQ7 743 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 LRRC2Q9BYS8 371 aa11.18□□□□□ -0.62
EPB41-208ENST00000460378 FAM13AO94988 1023 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 FGAP02671 866 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 CTSHP09668 335 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 ODF2Q5BJF6 829 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 ZNF654Q8IZM8 581 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 TMX2Q9Y320 296 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 DPYSL4O14531 572 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 SGPL1O95470 568 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 KRT2P35908 639 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 NOL9Q5SY16 702 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 COL1A1P02452 1464 aaPredicted RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 CST9Q5W186 159 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 POLIQ9UNA4 740 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 THPOP40225 353 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 RABEP1Q15276 862 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 CT47A1Q5JQC4 288 aaPredicted RBP11.17□□□□□ -0.62
EPB41-208ENST00000460378 NCAPH2Q6IBW4 605 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 CATSPER4Q7RTX7 472 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 NACA2Q9H009 215 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 PARP2Q9UGN5 583 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
EPB41-208ENST00000460378 PPFIA1Q13136 1202 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 TLK2Q86UE8 772 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
EPB41-208ENST00000460378 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 RTP1P59025 263 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 CEP57L1Q8IYX8 460 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 GGPS1O95749 300 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 RLBP1P12271 317 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 PRR16Q569H4 304 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 GBP3Q9H0R5 595 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 TLL1O43897 1013 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 PARNO95453 639 aaKnown RBP11.16□□□□□ -0.62
EPB41-208ENST00000460378 FOSL2P15408 326 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 RXRAP19793 462 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 OAZ1P54368 228 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 YAF2Q8IY57 180 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 SYMPKQ92797 1274 aaKnown RBP11.16□□□□□ -0.62
EPB41-208ENST00000460378 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
EPB41-208ENST00000460378 MTMR4Q9NYA4 1195 aa11.16□□□□□ -0.62
EPB41-208ENST00000460378 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
EPB41-208ENST00000460378 A0A0G2JLL6 359 aaPredicted RBP11.15□□□□□ -0.62
EPB41-208ENST00000460378 CARNS1A5YM72 827 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 NUCB1Q02818 461 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 LARP1BQ659C4 914 aaKnown RBP11.15□□□□□ -0.62
EPB41-208ENST00000460378 TWF2Q6IBS0 349 aaKnown RBP11.15□□□□□ -0.62
EPB41-208ENST00000460378 PRRT2Q7Z6L0 340 aaPredicted RBP11.15□□□□□ -0.62
EPB41-208ENST00000460378 IMPG2Q9BZV3 1241 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 FGFR2P21802 821 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 LDLRAD1Q5T700 205 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 GBP4Q96PP9 640 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 APOL6Q9BWW8 343 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 DEXIO95424 95 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 IDEP14735 1019 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 RBM25P49756 843 aaKnown RBP11.15□□□□□ -0.62
EPB41-208ENST00000460378 NACC1Q96RE7 527 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
EPB41-208ENST00000460378 SEPT4O43236 478 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 PPFIA3O75145 1194 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 Q6ZUG5 572 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 ARMCX2Q7L311 632 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 PGBD4Q96DM1 585 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 HIPK3Q9H422 1215 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.63
EPB41-208ENST00000460378 ZBTB5O15062 677 aa11.14□□□□□ -0.63
EPB41-208ENST00000460378 PGK1P00558 417 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms